RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CLPSL1A2RUU4 121 aa17.33■□□□□ 0.36
CLN5-202ENST00000485938 CDSNQ15517 529 aa17.33■□□□□ 0.36
CLN5-202ENST00000485938 SLC50A1Q9BRV3 221 aa17.33■□□□□ 0.36
CLN5-202ENST00000485938 AGPAT4-IT1Q9H0P7 198 aa17.33■□□□□ 0.36
CLN5-202ENST00000485938 FOXC2Q99958 501 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 CSTL1Q9H114 145 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 IGHV3-66A0A0C4DH42 116 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 K7ENP7 123 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 TRGV3P03979 118 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 ZFP36P26651 326 aaKnown RBP17.32■□□□□ 0.36
CLN5-202ENST00000485938 KLK9Q2XQG4 91 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 SMPXQ9UHP9 88 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 KLK9Q9UKQ9 250 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 SPCS1Q9Y6A9 102 aa17.32■□□□□ 0.36
CLN5-202ENST00000485938 FXYD2P54710 66 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 ECSCRQ19T08 205 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 OR5A1Q8NGJ0 315 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 ATP5LO75964 103 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 SMIM13P0DJ93 91 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 GCSHP23434 173 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 CHAC1Q9BUX1 264 aa17.31■□□□□ 0.36
CLN5-202ENST00000485938 HRNRQ86YZ3 2850 aaPredicted RBP17.31■□□□□ 0.36
CLN5-202ENST00000485938 DPM2O94777 84 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 GOSR1O95249 250 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 NEGR1Q7Z3B1 354 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 SPTBN4Q9H254 2564 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 TRAV8-2A0A0B4J237 113 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 CCL21O00585 134 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 GTSCR1Q86UQ5 136 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 CCDC140Q96MF4 163 aa17.3■□□□□ 0.36
CLN5-202ENST00000485938 SMIM17P0DL12 118 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 FABP2P12104 132 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 NRACQ8N912 160 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 IGHV7-4-1A0A0J9YVY3 117 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 TMEM8BA6NDV4 472 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 G3V4G9 280 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 ATP6V0E1O15342 81 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 SAMD5Q5TGI4 173 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 SIRPDQ9H106 197 aa17.29■□□□□ 0.36
CLN5-202ENST00000485938 TRBV25-1A0A075B6N4 114 aa17.28■□□□□ 0.36
CLN5-202ENST00000485938 IGHV3OR16-13A0A075B7E8 117 aa17.28■□□□□ 0.36
CLN5-202ENST00000485938 IGHV3-74A0A0B4J1X5 117 aa17.28■□□□□ 0.36
CLN5-202ENST00000485938 PRSS47A8MTI9 375 aa17.28■□□□□ 0.36
CLN5-202ENST00000485938 ZC2HC1BQ5TFG8 222 aa17.28■□□□□ 0.36
CLN5-202ENST00000485938 AJUBAQ96IF1 538 aa17.27■□□□□ 0.36
CLN5-202ENST00000485938 TMEM78Q5T7P6 136 aa17.27■□□□□ 0.35
CLN5-202ENST00000485938 CLEC19AQ6UXS0 136 aa17.27■□□□□ 0.35
CLN5-202ENST00000485938 HLA-DRB4P13762 266 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 HLA-DRB4X5D2U9 266 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 TRAV26-2A0A0B4J265 109 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 LAGE3Q14657 143 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 MRPL53Q96EL3 112 aaKnown RBP17.26■□□□□ 0.35
CLN5-202ENST00000485938 MRPL35Q9NZE8 188 aaKnown RBP17.26■□□□□ 0.35
CLN5-202ENST00000485938 RAXQ9Y2V3 346 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 SPTA1P02549 2419 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 RELNP78509 3460 aa17.26■□□□□ 0.35
CLN5-202ENST00000485938 PHLDA1Q8WV24 401 aaPredicted RBP17.25■□□□□ 0.35
CLN5-202ENST00000485938 IGHV3-49A0A0A0MS15 119 aa17.25■□□□□ 0.35
CLN5-202ENST00000485938 ADORA2A-AS1P86434 159 aa17.25■□□□□ 0.35
CLN5-202ENST00000485938 C8orf86Q6ZUL3 223 aa17.25■□□□□ 0.35
CLN5-202ENST00000485938 TMEM160Q9NX00 188 aa17.25■□□□□ 0.35
CLN5-202ENST00000485938 TRAV40A0A0B4J280 105 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 G3V318 75 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 RIPPLY3P57055 190 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 Q6ZQT7 251 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 C9orf47Q6ZRZ4 202 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 TM2D2Q9BX73 214 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 UFC1Q9Y3C8 167 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 IGHV4-4A0A075B6R2 117 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 K7ERJ3 54 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 MYOZ3Q8TDC0 251 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 HIF1ANQ9NWT6 349 aa17.24■□□□□ 0.35
CLN5-202ENST00000485938 CACNA1BQ00975 2339 aa17.23■□□□□ 0.35
CLN5-202ENST00000485938 LINC01548A6NM66 108 aa17.23■□□□□ 0.35
CLN5-202ENST00000485938 ZNF207O43670 478 aaKnown RBP17.23■□□□□ 0.35
CLN5-202ENST00000485938 METTL26Q96S19 204 aa17.23■□□□□ 0.35
CLN5-202ENST00000485938 CEND1Q8N111 149 aa17.22■□□□□ 0.35
CLN5-202ENST00000485938 EEF1AKMT3Q96AZ1 226 aa17.22■□□□□ 0.35
CLN5-202ENST00000485938 MED13LQ71F56 2210 aa17.22■□□□□ 0.35
CLN5-202ENST00000485938 UBE2E1P51965 193 aa17.22■□□□□ 0.35
CLN5-202ENST00000485938 U3KQE9 123 aa17.22■□□□□ 0.35
CLN5-202ENST00000485938 SRSF1Q07955 248 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLN5-202ENST00000485938 A0A087WX48 190 aa17.21■□□□□ 0.35
CLN5-202ENST00000485938 MAPKAPK5-AS1Q8N8E1 139 aa17.21■□□□□ 0.35
CLN5-202ENST00000485938 SPANXN1Q5VSR9 72 aa17.2■□□□□ 0.34
CLN5-202ENST00000485938 TRBV7-1A0A0A6YYK4 115 aa17.2■□□□□ 0.34
CLN5-202ENST00000485938 SAA4P35542 130 aa17.2■□□□□ 0.34
CLN5-202ENST00000485938 NHP2Q9NX24 153 aaKnown RBP17.2■□□□□ 0.34
CLN5-202ENST00000485938 EFNA4P52798 201 aa17.19■□□□□ 0.34
CLN5-202ENST00000485938 PRR9Q5T870 116 aa17.18■□□□□ 0.34
CLN5-202ENST00000485938 ATRXP46100 2492 aa17.18■□□□□ 0.34
CLN5-202ENST00000485938 NBASA2RRP1 2371 aa17.18■□□□□ 0.34
CLN5-202ENST00000485938 H3BVH4 76 aa17.18■□□□□ 0.34
CLN5-202ENST00000485938 PLNP26678 52 aa17.17■□□□□ 0.34
CLN5-202ENST00000485938 MRAP2Q96G30 205 aa17.17■□□□□ 0.34
CLN5-202ENST00000485938 CENPVL3A0A0U1RRI6 287 aa17.16■□□□□ 0.34
CLN5-202ENST00000485938 SMIM2Q9BVW6 85 aa17.16■□□□□ 0.34
CLN5-202ENST00000485938 K7EMI3 77 aa17.16■□□□□ 0.34
CLN5-202ENST00000485938 TAL2Q16559 108 aa17.16■□□□□ 0.34
CLN5-202ENST00000485938 C16orf92Q96LL3 132 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms