RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 LINC01587Q99440 93 aa12.91□□□□□ -0.34
CPNE1-224ENST00000483359 RBFOX3A6NFN3 312 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 PMS2P11Q13670 270 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 EIF5A2Q9GZV4 153 aaKnown RBP12.9□□□□□ -0.34
CPNE1-224ENST00000483359 STAB2Q8WWQ8 2551 aa12.9□□□□□ -0.34
CPNE1-224ENST00000483359 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF705GA8MUZ8 300 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-224ENST00000483359 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 TMEM183BQ1AE95 376 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
CPNE1-224ENST00000483359 FBLL1A6NHQ2 334 aaKnown RBP12.88□□□□□ -0.35
CPNE1-224ENST00000483359 H7BYZ3 331 aa12.88□□□□□ -0.35
CPNE1-224ENST00000483359 PDE6DO43924 150 aa12.88□□□□□ -0.35
CPNE1-224ENST00000483359 TAGLN2P37802 199 aaKnown RBP12.88□□□□□ -0.35
CPNE1-224ENST00000483359 RAB14P61106 215 aa12.88□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
CPNE1-224ENST00000483359 Q8NAQ8 132 aa12.88□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF324O75467 553 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-224ENST00000483359 MIFP14174 115 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 RPL35P42766 123 aaKnown RBP12.87□□□□□ -0.35
CPNE1-224ENST00000483359 EMP1P54849 157 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 GCGP01275 180 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 CEBPGP53567 150 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 MUC21Q5SSG8 566 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 NAGKQ9UJ70 344 aa12.87□□□□□ -0.35
CPNE1-224ENST00000483359 AZU1P20160 251 aa12.86□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-224ENST00000483359 LTAP01374 205 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 NDUFA5Q16718 116 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 SMUG1Q53HV7 270 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 NEU1Q99519 415 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 RGS13O14921 159 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 TAS2R60P59551 318 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 Q6AWC8 147 aa12.85□□□□□ -0.35
CPNE1-224ENST00000483359 ZC2HC1AQ96GY0 325 aa12.84□□□□□ -0.35
CPNE1-224ENST00000483359 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
CPNE1-224ENST00000483359 EDA2RQ9HAV5 297 aa12.84□□□□□ -0.35
CPNE1-224ENST00000483359 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
CPNE1-224ENST00000483359 RAB19A4D1S5 217 aa12.83□□□□□ -0.35
CPNE1-224ENST00000483359 SMIM9A6NGZ8 99 aa12.83□□□□□ -0.35
CPNE1-224ENST00000483359 ZNF674Q2M3X9 581 aa12.83□□□□□ -0.35
CPNE1-224ENST00000483359 CENPWQ5EE01 88 aa12.83□□□□□ -0.35
CPNE1-224ENST00000483359 BAGE2Q86Y30 109 aa12.83□□□□□ -0.35
CPNE1-224ENST00000483359 TRAV21A0A0B4J279 112 aa12.83□□□□□ -0.36
CPNE1-224ENST00000483359 CBY3A6NI87 242 aa12.83□□□□□ -0.36
CPNE1-224ENST00000483359 S100A9P06702 114 aaKnown RBP12.83□□□□□ -0.36
CPNE1-224ENST00000483359 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
CPNE1-224ENST00000483359 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
CPNE1-224ENST00000483359 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
CPNE1-224ENST00000483359 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
CPNE1-224ENST00000483359 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
CPNE1-224ENST00000483359 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
CPNE1-224ENST00000483359 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
CPNE1-224ENST00000483359 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 PGPEP1LA6NFU8 196 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 FAM159AQ6UWV7 190 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 PARLQ9H300 379 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 TRBV20OR9-2A0A075B6H5 130 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 GNG4P50150 75 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 PRR27Q6MZM9 219 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
CPNE1-224ENST00000483359 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
CPNE1-224ENST00000483359 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
CPNE1-224ENST00000483359 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
CPNE1-224ENST00000483359 CRIP1P50238 77 aa12.8□□□□□ -0.36
CPNE1-224ENST00000483359 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
CPNE1-224ENST00000483359 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
CPNE1-224ENST00000483359 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
CPNE1-224ENST00000483359 C11orf21Q9P2W6 132 aa12.8□□□□□ -0.36
CPNE1-224ENST00000483359 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
CPNE1-224ENST00000483359 PLAC8L1A1L4L8 177 aa12.79□□□□□ -0.36
CPNE1-224ENST00000483359 C9JQL5 133 aa12.79□□□□□ -0.36
CPNE1-224ENST00000483359 MGST1P10620 155 aaKnown RBP12.79□□□□□ -0.36
CPNE1-224ENST00000483359 SH2D1AO60880 128 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 MLST8Q9BVC4 326 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 M0R036 132 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 PEA15Q15121 130 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 FAM162BQ5T6X4 162 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
CPNE1-224ENST00000483359 GNRH2O43555 120 aa12.77□□□□□ -0.37
CPNE1-224ENST00000483359 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
CPNE1-224ENST00000483359 COX8CQ7Z4L0 72 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms