RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 LAGE3Q14657 143 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 TMEM190Q8WZ59 177 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
VTI1A-205ENST00000483122 CNFNQ9BYD5 112 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 MALRD1Q5VYJ5 2156 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 CACNA1AO00555 2505 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 NHLRC4P0CG21 123 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-205ENST00000483122 ZFAND6Q6FIF0 208 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 PPP1R27Q86WC6 154 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 TEN1Q86WV5 123 aa9.16□□□□□ -0.94
VTI1A-205ENST00000483122 CD40P25942 277 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 PLNP26678 52 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 PDE6HQ13956 83 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 ANXA2RQ3ZCQ2 193 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 TGFAP01135 160 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 UBE2D3P61077 147 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 UBE2D2P62837 147 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
VTI1A-205ENST00000483122 SPTBN2O15020 2390 aa9.15□□□□□ -0.95
VTI1A-205ENST00000483122 AKAP13Q12802 2813 aa9.15□□□□□ -0.95
VTI1A-205ENST00000483122 F8VRH5 84 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 H7C1H1 209 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 TCL1BO95988 128 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 ZNF688P0C7X2 276 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 NRACQ8N912 160 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 C8orf31Q8N9H6 132 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 A6NJY4 79 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 UBE2D1P51668 147 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 DLX6P56179 175 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 TEX29Q8N6K0 151 aa9.14□□□□□ -0.95
VTI1A-205ENST00000483122 H3BVH4 76 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 IGHG4P01861 327 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 ERCC8Q13216 396 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 ZNF474Q6S9Z5 364 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-205ENST00000483122 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 CITED1Q99966 193 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 KLK15Q9H2R5 256 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 ASPMQ8IZT6 3477 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 SEM1Q6ZVN7 128 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
VTI1A-205ENST00000483122 IGHV1-8P0DP01 117 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 UCNP55089 124 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 CFHR4Q92496 578 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 NDUFB3O43676 98 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 LOXP28300 417 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-205ENST00000483122 SRSF2Q01130 221 aaKnown RBP9.12□□□□□ -0.95
VTI1A-205ENST00000483122 GFRALQ6UXV0 394 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 AJUBAQ96IF1 538 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
VTI1A-205ENST00000483122 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 IGHV1-3A0A0C4DH29 117 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 A8MWV9 139 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 CD7P09564 240 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
VTI1A-205ENST00000483122 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 SMAD5-AS1Q9Y6J3 95 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 LOC400499M0QZD8 3231 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 ZZEF1O43149 2961 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 KALRNO60229 2985 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 CNIH1O95406 144 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 SLC25A16P16260 332 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 HERV-K104P63124 156 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 DYNAPQ8N1N2 210 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
VTI1A-205ENST00000483122 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 TMEM155Q4W5P6 130 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 VCX2Q9H322 139 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 NDUFA11Q86Y39 141 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 KLHL30-AS1Q8NEE0 82 aa9.1□□□□□ -0.95
VTI1A-205ENST00000483122 K7ENP7 123 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 PRTN3P24158 256 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 ZNF672Q499Z4 452 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-205ENST00000483122 IL17RELQ6ZVW7 336 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 CCL17Q92583 94 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
VTI1A-205ENST00000483122 TMEM178BH3BS89 294 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 RHODO00212 210 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 CRLF1O75462 422 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV3-23P01764 117 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 COX6B1P14854 86 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 SRD5A1P18405 259 aa9.09□□□□□ -0.96
VTI1A-205ENST00000483122 CEP295Q9C0D2 2601 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 TRAV4A0A0B4J268 109 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 TMEM262E9PQX1 116 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms