RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SLC25A6P12236 298 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 PLP1P60201 277 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 C5orf47Q569G3 176 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 GFI1BQ5VTD9 330 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 PATE2Q6UY27 113 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 Q6ZTI0 123 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 ACOT7LQ6ZUV0 252 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 TMED4Q7Z7H5 227 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 CCDC190Q86UF4 302 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 EIF4E3Q8N5X7 224 aaKnown RBP5.06□□□□□ -1.6
CSDE1-206ENST00000483030 C20orf144Q9BQM9 153 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SRRQ9GZT4 340 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 TMPRSS5Q9H3S3 457 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 PRAC2D3DTV9 90 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 IFNA5P01569 189 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 HOXB5P09067 269 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 ZNF25P17030 456 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-206ENST00000483030 TMEM128Q5BJH2 165 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 TRIQKQ629K1 86 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 TEPPQ6URK8 271 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 DYNC2LI1Q8TCX1 351 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 ARL6Q9H0F7 186 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 ZNF331Q9NQX6 463 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-206ENST00000483030 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 URGCP-MRPS24S4R325 110 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 FAT1Q14517 4588 aa5.05□□□□□ -1.6
CSDE1-206ENST00000483030 TRGV2A0A075B6R0 118 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 TRAV12-3A0A0B4J271 114 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 H3BTX0 84 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 MRPS12O15235 138 aaKnown RBP5.04□□□□□ -1.6
CSDE1-206ENST00000483030 NXPH4O95158 308 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 DNAH10OSP0CZ25 163 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 S100A11P31949 105 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 ERVFC1-1P60608 527 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 PKIAP61925 76 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 RRAS2P62070 204 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-206ENST00000483030 SELENOTP62341 195 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 DAZ2Q13117 558 aaKnown RBP5.04□□□□□ -1.6
CSDE1-206ENST00000483030 LCN15Q6UWW0 184 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 S100A7AQ86SG5 101 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 C12orf45Q8N5I9 185 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-206ENST00000483030 LRTM2Q8N967 370 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 SSBP4Q9BWG4 385 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-206ENST00000483030 ARV1Q9H2C2 271 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 MED9Q9NWA0 146 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 PSENENQ9NZ42 101 aa5.04□□□□□ -1.6
CSDE1-206ENST00000483030 FLG2Q5D862 2391 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-206ENST00000483030 A0A087WTM6 91 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 TRGV1A0A0A0MS02 117 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 SLC17A3O00476 420 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 PAX4O43316 350 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 SFT2D2O95562 160 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 CT45A10P0DMU9 189 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 CXCL2P19875 107 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 PPP1R1AQ13522 171 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 ICAM4Q14773 271 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 VAMP3Q15836 100 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 COX19Q49B96 90 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 CLLU1Q5K131 121 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 LINC00305Q7Z4B0 112 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 ZNF431Q8TF32 576 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-206ENST00000483030 PYGO2Q9BRQ0 406 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 SLC50A1Q9BRV3 221 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 NPVFQ9HCQ7 196 aa5.03□□□□□ -1.6
CSDE1-206ENST00000483030 C5orf52A6NGY3 159 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 H3BQ15 152 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 GOSR2O14653 212 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 ZNF324O75467 553 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-206ENST00000483030 IGHV3-53P01767 116 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 IL7P13232 177 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 GCSHP23434 173 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 DDTP30046 118 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 TNFSF8P32971 234 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 LEPP41159 167 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 RAB2AP61019 212 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 HERV-K104P63124 156 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 HAMPP81172 84 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 SLC38A11Q08AI6 406 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 RAB31Q13636 194 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 MORN5Q5VZ52 161 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 DGAT2L7PQ6IED9 249 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 LYPD5Q6UWN5 251 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 ZNF546Q86UE3 836 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 NFE4Q86UQ8 179 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 BPIFA4PQ86YQ2 179 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 C18orf15Q96N68 181 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 SOSTQ9BQB4 213 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 FUT9Q9Y231 359 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 KLF12Q9Y4X4 402 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 ICOSQ9Y6W8 199 aa5.02□□□□□ -1.61
CSDE1-206ENST00000483030 TRAV9-2A0A087WT02 112 aa5.01□□□□□ -1.61
CSDE1-206ENST00000483030 K7EPK0 472 aa5.01□□□□□ -1.61
CSDE1-206ENST00000483030 AGPAT2O15120 278 aa5.01□□□□□ -1.61
CSDE1-206ENST00000483030 SSSCA1O60232 199 aa5.01□□□□□ -1.61
CSDE1-206ENST00000483030 COX7A2P2O60397 106 aa5.01□□□□□ -1.61
CSDE1-206ENST00000483030 PRAF2O60831 178 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms