RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 CSN1S1P47710 185 aa11.36□□□□□ -0.59
RAB11FIP3-209ENST00000483002 MUC21Q5SSG8 566 aa11.36□□□□□ -0.59
RAB11FIP3-209ENST00000483002 Q8N1X5 172 aa11.36□□□□□ -0.59
RAB11FIP3-209ENST00000483002 C8orf49Q96NF6 230 aa11.36□□□□□ -0.59
RAB11FIP3-209ENST00000483002 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
RAB11FIP3-209ENST00000483002 C17orf112F2Z3M2 114 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 CRYBA4P53673 196 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 ZNF415Q09FC8 603 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 SLAQ13239 276 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 FHL2Q14192 279 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 S100ZQ8WXG8 99 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
RAB11FIP3-209ENST00000483002 CYCSP99999 105 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 MRPL23Q16540 153 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 LINC00299Q6ZSB3 139 aa11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
RAB11FIP3-209ENST00000483002 TRGV4A0A0C4DH28 118 aa11.33□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TRBV7-9A0A0J9YWB2 115 aa11.33□□□□□ -0.6
RAB11FIP3-209ENST00000483002 ZNF266Q14584 549 aa11.33□□□□□ -0.6
RAB11FIP3-209ENST00000483002 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
RAB11FIP3-209ENST00000483002 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
RAB11FIP3-209ENST00000483002 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 INMT-MINDY4F8WBC2 141 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 SFTA3P0C7M3 94 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 UBE2L3P68036 154 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 ATP5SQ99766 215 aa11.32□□□□□ -0.6
RAB11FIP3-209ENST00000483002 UPK1BO75841 260 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 H2BFSP57053 126 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TMEM183AQ8IXX5 376 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 ZNF479Q96JC4 524 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 HYLS1Q96M11 299 aa11.31□□□□□ -0.6
RAB11FIP3-209ENST00000483002 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 EREGO14944 169 aa11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 K7EQD1 137 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 IFNA5P01569 189 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 SRIP30626 198 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TAS2R45P59539 299 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 IFITM3Q01628 133 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 KHDC3LQ587J8 217 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 Q6AWC8 147 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 RASL10AQ92737 203 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 SPXQ9BT56 116 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 HSPB11Q9Y547 144 aa11.29□□□□□ -0.6
RAB11FIP3-209ENST00000483002 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 PGPA6NDG6 321 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 MPC2O95563 127 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 GYPEP15421 78 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 OR10G4Q8NGN3 311 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 PCNPQ8WW12 178 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 LY96Q9Y6Y9 160 aa11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 APOBP04114 4563 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-209ENST00000483002 GNRH2O43555 120 aa11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 SSNA1O43805 119 aa11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 RPL12P30050 165 aaKnown RBP11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 NFE4Q86UQ8 179 aa11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 OTORQ9NRC9 128 aa11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 MBD2Q9UBB5 411 aa11.27□□□□□ -0.61
RAB11FIP3-209ENST00000483002 PET100P0DJ07 73 aa11.26□□□□□ -0.61
RAB11FIP3-209ENST00000483002 WFDC10BQ8IUB3 73 aa11.26□□□□□ -0.61
RAB11FIP3-209ENST00000483002 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
RAB11FIP3-209ENST00000483002 MARVELD1Q9BSK0 173 aa11.26□□□□□ -0.61
RAB11FIP3-209ENST00000483002 PTTG2Q9NZH5 202 aa11.26□□□□□ -0.61
RAB11FIP3-209ENST00000483002 ORM1P02763 201 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 EVI2AP22794 236 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 OR4C5Q8NGB2 326 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
RAB11FIP3-209ENST00000483002 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 M0R2P5 195 aa11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 TDRG1Q3Y452 100 aa11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 TXNDC17Q9BRA2 123 aa11.24□□□□□ -0.61
RAB11FIP3-209ENST00000483002 A0A087WTM6 91 aa11.23□□□□□ -0.61
RAB11FIP3-209ENST00000483002 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
RAB11FIP3-209ENST00000483002 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
RAB11FIP3-209ENST00000483002 C9JCJ5 164 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms