RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 CKS2P33552 79 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 XGP55808 180 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 CD3EP07766 207 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 Q6ZUT4 128 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 ORMDL3Q8N138 153 aa9.76□□□□□ -0.85
CCDC78-213ENST00000482878 AGRNO00468 2067 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.75□□□□□ -0.85
CCDC78-213ENST00000482878 TMEM213A2RRL7 107 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 PRSS29PA6NIE9 313 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 FOXC2Q99958 501 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 FBXL15Q9H469 300 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 IGF2-ASQ6U949 168 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 NPIPB5A8MRT5 1133 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 H3BVH4 76 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 IGLV1-47P01700 117 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 RBP4P02753 201 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 PSMB2P49721 201 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
CCDC78-213ENST00000482878 PHLDA1Q8WV24 401 aaPredicted RBP9.75□□□□□ -0.85
CCDC78-213ENST00000482878 I3L2K1 104 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 CLEC3BP05452 202 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
CCDC78-213ENST00000482878 KLRD1Q13241 179 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 PTH2Q96A98 100 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 TMEM14CQ9P0S9 112 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 TRBV7-9A0A0J9YWB2 115 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 IGKV1-17P01599 117 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 ZFAND6Q6FIF0 208 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 RASL11BQ9BPW5 248 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
CCDC78-213ENST00000482878 TGFAP01135 160 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 IGKCP01834 107 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 RRN3P1Q2M238 152 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 A0A1B0GW15 77 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 E7EQL1 145 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 SCGB2A1O75556 95 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 CT45A10P0DMU9 189 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 TMEM95Q3KNT9 176 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
CCDC78-213ENST00000482878 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 LEPP41159 167 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 KLF17Q5JT82 389 aaPredicted RBP9.72□□□□□ -0.85
CCDC78-213ENST00000482878 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 IL4P05112 153 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 CRIP1P50238 77 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 SORL1Q92673 2214 aa9.72□□□□□ -0.85
CCDC78-213ENST00000482878 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 IGHV3OR16-8A0A075B7F1 116 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 NPYP01303 97 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 TM2D2Q9BX73 214 aa9.71□□□□□ -0.85
CCDC78-213ENST00000482878 TWIST1Q15672 202 aa9.71□□□□□ -0.86
CCDC78-213ENST00000482878 SHANK2-AS3Q9BTD1 123 aa9.71□□□□□ -0.86
CCDC78-213ENST00000482878 K7EIM0 57 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 M0R3E3 92 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 MRPL51Q4U2R6 128 aaKnown RBP9.7□□□□□ -0.86
CCDC78-213ENST00000482878 ABCA2Q9BZC7 2435 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 TRAV40A0A0B4J280 105 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 NCBP2LA6PVI3 153 aaKnown RBP9.7□□□□□ -0.86
CCDC78-213ENST00000482878 DPM2O94777 84 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 TRBV6-1A0A0K0K1D8 114 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 ARL3P36405 182 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 FAM104BQ5XKR9 115 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
CCDC78-213ENST00000482878 RPEQ96AT9 228 aa9.7□□□□□ -0.86
CCDC78-213ENST00000482878 WNK1Q9H4A3 2382 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 H3BRN7 92 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 EVI2AP22794 236 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 ZNF562Q6V9R5 426 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 Q8NA96 180 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 PRO0461Q9UI25 63 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
CCDC78-213ENST00000482878 MAPKAPK5-AS1Q8N8E1 139 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 ZNF491Q8N8L2 437 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 NDUFA3O95167 84 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 ODF1Q14990 250 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
CCDC78-213ENST00000482878 IGHV3OR16-10A0A075B7F0 116 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 FHL3Q13643 280 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 UBTD1Q9HAC8 227 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 MRPS12O15235 138 aaKnown RBP9.68□□□□□ -0.86
CCDC78-213ENST00000482878 TTC32Q5I0X7 151 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
CCDC78-213ENST00000482878 RNF125Q96EQ8 232 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms