RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
ATG4B-220ENST00000482507 CKS2P33552 79 aa11.47□□□□□ -0.57
ATG4B-220ENST00000482507 UNC79Q9P2D8 2635 aa11.47□□□□□ -0.57
ATG4B-220ENST00000482507 IGHV3OR16-13A0A075B7E8 117 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 IGHV3-74A0A0B4J1X5 117 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 ORM1P02763 201 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 CLEC3BP05452 202 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 PPIFP30405 207 aaKnown RBP11.46□□□□□ -0.57
ATG4B-220ENST00000482507 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
ATG4B-220ENST00000482507 NOTCH2Q04721 2471 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 ATP6V0E1O15342 81 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 HBDP02042 147 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 BMI1P35226 326 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 CCDC140Q96MF4 163 aa11.46□□□□□ -0.58
ATG4B-220ENST00000482507 G3V318 75 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 K7EP13 123 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 BUB3O43684 328 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 RBX1P62877 108 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-220ENST00000482507 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
ATG4B-220ENST00000482507 OR4C5Q8NGB2 326 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
ATG4B-220ENST00000482507 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
ATG4B-220ENST00000482507 CNFNQ9BYD5 112 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 ZNF469Q96JG9 3925 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-220ENST00000482507 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 CD5LO43866 347 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 GATA1P15976 413 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-220ENST00000482507 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
ATG4B-220ENST00000482507 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 SRSF2Q01130 221 aaKnown RBP11.43□□□□□ -0.58
ATG4B-220ENST00000482507 CLEC19AQ6UXS0 136 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 Q6ZQT7 251 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
ATG4B-220ENST00000482507 SAA4P35542 130 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 C21orf62-AS1Q17RA5 79 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 DPF1Q92782 380 aa11.43□□□□□ -0.58
ATG4B-220ENST00000482507 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 EVI2AP22794 236 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 PCP4P48539 62 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 KLK9Q2XQG4 91 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 TMEM97Q5BJF2 176 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 BOD1L2Q8IYS8 172 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 C18orf15Q96N68 181 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 AGPAT4-IT1Q9H0P7 198 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 KLK9Q9UKQ9 250 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
ATG4B-220ENST00000482507 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
ATG4B-220ENST00000482507 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
ATG4B-220ENST00000482507 UBE2E1P51965 193 aa11.41□□□□□ -0.58
ATG4B-220ENST00000482507 CLEC2AQ6UVW9 174 aa11.41□□□□□ -0.58
ATG4B-220ENST00000482507 LMO4P61968 165 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 PCP2Q8IVA1 136 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 OR1N2Q8NGR9 330 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 LINC01546A6NGU7 62 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 TRGV3P03979 118 aa11.4□□□□□ -0.58
ATG4B-220ENST00000482507 C7orf71A4D174 169 aa11.39□□□□□ -0.59
ATG4B-220ENST00000482507 SMAD7O15105 426 aaKnown RBP11.39□□□□□ -0.59
ATG4B-220ENST00000482507 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
ATG4B-220ENST00000482507 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
ATG4B-220ENST00000482507 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
ATG4B-220ENST00000482507 LEPP41159 167 aa11.39□□□□□ -0.59
ATG4B-220ENST00000482507 PIMREGQ9BSJ6 248 aa11.39□□□□□ -0.59
ATG4B-220ENST00000482507 CENPVL3A0A0U1RRI6 287 aa11.38□□□□□ -0.59
ATG4B-220ENST00000482507 FLNBO75369 2602 aaKnown RBP11.38□□□□□ -0.59
ATG4B-220ENST00000482507 PDZD2O15018 2839 aa11.38□□□□□ -0.59
ATG4B-220ENST00000482507 ADAMTSL5Q6ZMM2 481 aa11.38□□□□□ -0.59
ATG4B-220ENST00000482507 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
ATG4B-220ENST00000482507 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
ATG4B-220ENST00000482507 PPBPP02775 128 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 DEFB113Q30KQ7 82 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 C8orf86Q6ZUL3 223 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 TMEM219Q86XT9 240 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 NMUP48645 174 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 SEC11AP67812 179 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
ATG4B-220ENST00000482507 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 IGKV2D-26A0A0A0MRZ7 120 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 FCER1GP30273 86 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 RAB9AP51151 201 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 ODF1Q14990 250 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
ATG4B-220ENST00000482507 JMJD8Q96S16 334 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms