RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
C9orf3-218ENST00000482056 EVI2AP22794 236 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 OR2K2Q8NGT1 345 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 PIFOQ8TCI5 191 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 AP1S3Q96PC3 154 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 ATP5LO75964 103 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 TRGV3P03979 118 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 PRSS1P07477 247 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 ARL3P36405 182 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 NMUP48645 174 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 ERASQ7Z444 233 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 TMEM219Q86XT9 240 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
C9orf3-218ENST00000482056 SPTBN1Q01082 2364 aaKnown RBP11.77□□□□□ -0.53
C9orf3-218ENST00000482056 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
C9orf3-218ENST00000482056 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
C9orf3-218ENST00000482056 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 COL6A6A6NMZ7 2263 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 ATRXP46100 2492 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 PRSS47A8MTI9 375 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 LINC00477Q96M19 166 aa11.76□□□□□ -0.53
C9orf3-218ENST00000482056 H3BRM9 83 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 NDUFA4O00483 81 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 GAS8-AS1O95177 125 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 IGKCP01834 107 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 LY6DQ14210 128 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 LAGE3Q14657 143 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 ODF1Q14990 250 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 MYOZ3Q8TDC0 251 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 RNASE8Q8TDE3 154 aaKnown RBP11.75□□□□□ -0.53
C9orf3-218ENST00000482056 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 ZMAT4Q9H898 229 aa11.75□□□□□ -0.53
C9orf3-218ENST00000482056 OVOL1O14753 267 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-218ENST00000482056 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 FOXE3Q13461 319 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 MRAP2Q96G30 205 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 MED13LQ71F56 2210 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 H3BUA1 57 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 DPM2O94777 84 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 TCTAP57738 103 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 USMG5Q96IX5 58 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 FOXC2Q99958 501 aa11.74□□□□□ -0.53
C9orf3-218ENST00000482056 HIVEP3Q5T1R4 2406 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 IGHV3OR16-10A0A075B7F0 116 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 ADAMTSL5Q6ZMM2 481 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 MEGF9Q9H1U4 602 aa11.73□□□□□ -0.53
C9orf3-218ENST00000482056 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 C9orf118A6NHY6 69 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 H3BVH4 76 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 IGF1P05019 195 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 PCP2Q8IVA1 136 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 NRACQ8N912 160 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 BRI3O95415 125 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf3-218ENST00000482056 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
C9orf3-218ENST00000482056 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
C9orf3-218ENST00000482056 KIR3DS1Q14943 382 aa11.71□□□□□ -0.53
C9orf3-218ENST00000482056 C19orf84I3L1E1 186 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 CDKN1BP46527 198 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 RBX1P62877 108 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 BRD3OSQ6XYD6 125 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 C20orf173Q96LM9 149 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
C9orf3-218ENST00000482056 ASIPP42127 132 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 RELNP78509 3460 aa11.7□□□□□ -0.54
C9orf3-218ENST00000482056 CACNA1BQ00975 2339 aa11.69□□□□□ -0.54
C9orf3-218ENST00000482056 TMEM8BA6NDV4 472 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 NDUFS8O00217 210 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 IGHG2P01859 326 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 MED14OSP0DP75 135 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 GNLYP22749 145 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 PRR9Q5T870 116 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
C9orf3-218ENST00000482056 PRORYQ9H606 182 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms