RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 SOSTQ9BQB4 213 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 AAMDCQ9H7C9 122 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 RAB26Q9ULW5 256 aa4.98□□□□□ -1.61
USP54-213ENST00000481991 LRP2P98164 4655 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 PIGBOS1A0A0B4J2F0 54 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 C5orf51A6NDU8 294 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 RGS5O15539 181 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 GNRH2O43555 120 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 OR10J4P0C629 311 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 UBE2MP61081 183 aaKnown RBP4.97□□□□□ -1.61
USP54-213ENST00000481991 NCS1P62166 190 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 POLR2GP62487 172 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP54-213ENST00000481991 RAB31Q13636 194 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 ZNF546Q86UE3 836 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 SLC25A29Q8N8R3 303 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 UBE2WQ96B02 151 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 ZC2HC1AQ96GY0 325 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 DNAJC30Q96LL9 226 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 Q9H521 79 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 GPN1Q9HCN4 374 aaPredicted RBP4.97□□□□□ -1.61
USP54-213ENST00000481991 KLK12Q9UKR0 248 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 RABL2BQ9UNT1 228 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 PRELID1Q9Y255 219 aa4.97□□□□□ -1.61
USP54-213ENST00000481991 TRGV11A0A075B6L2 103 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 FBLL1A6NHQ2 334 aaKnown RBP4.96□□□□□ -1.62
USP54-213ENST00000481991 M0R2P5 195 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 SSSCA1O60232 199 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 SCGB1D2O95969 90 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 GATA1P15976 413 aaPredicted RBP4.96□□□□□ -1.62
USP54-213ENST00000481991 CRISP2P16562 243 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 BAK1Q16611 211 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 C14orf177Q52M58 125 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 KCNIP4Q6PIL6 250 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 ZFAND2AQ8N6M9 145 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.62
USP54-213ENST00000481991 TRBV19A0A075B6N1 114 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 GAGE12JA6NER3 117 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 ZNF253O75346 499 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 NMBP08949 121 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 SLC25A6P12236 298 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 ZNF138P52744 262 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 GAGE1Q13065 139 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 GAGE4Q13068 117 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 GAGE5Q13069 117 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 IL18Q14116 193 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 RHOHQ15669 191 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 GAGE13Q4V321 117 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 C4orf48Q5BLP8 95 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 C12orf45Q8N5I9 185 aaPredicted RBP4.95□□□□□ -1.62
USP54-213ENST00000481991 Q8TAT8 98 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 AP3S1Q92572 193 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 MRPL53Q96EL3 112 aaKnown RBP4.95□□□□□ -1.62
USP54-213ENST00000481991 SH3BGRL3Q9H299 93 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 SLC39A9Q9NUM3 307 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 ZNF492Q9P255 531 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 DNAH8Q96JB1 4490 aa4.95□□□□□ -1.62
USP54-213ENST00000481991 TMEM262E9PQX1 116 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 SEC11BP0C7V7 166 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 PYYP10082 97 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 CAMLGP49069 296 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 SSBP1Q04837 148 aaKnown RBP4.94□□□□□ -1.62
USP54-213ENST00000481991 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 MIC13Q5XKP0 118 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 OR1L4Q8NGR5 311 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 ATP5SQ99766 215 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 OR51M1Q9H341 326 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 VCX3AQ9NNX9 186 aa4.94□□□□□ -1.62
USP54-213ENST00000481991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.94□□□□□ -1.62
USP54-213ENST00000481991 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 A0A087WX48 190 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 NDUFB4O95168 129 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 CSN1S1P47710 185 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 TMEM128Q5BJH2 165 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 NRARPQ7Z6K4 114 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 OR2T35Q8NGX2 323 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 GTSF1Q8WW33 167 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 SMIM8Q96KF7 97 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 LINC01600Q96MT4 127 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 MGST2Q99735 147 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 GSKIPQ9P0R6 139 aa4.93□□□□□ -1.62
USP54-213ENST00000481991 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 TRBV6-4A0A1B0GX49 114 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 PGPA6NDG6 321 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 PANO1I0J062 215 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 K7EPK0 472 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 TSC22D2O75157 780 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 HLA-DQA1P01909 254 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 BCAP31P51572 246 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 MRPS10P82664 201 aaKnown RBP4.92□□□□□ -1.62
USP54-213ENST00000481991 ID3Q02535 119 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 ELOBQ15370 118 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 DPPA3Q6W0C5 159 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 MCFD2Q8NI22 146 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 PFDN5Q99471 154 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 FUNDC2Q9BWH2 189 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 C1orf43Q9BWL3 253 aa4.92□□□□□ -1.62
USP54-213ENST00000481991 C20orf85Q9H1P6 137 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms