RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
SIK3-210ENST00000480468 IGHV4-4A0A075B6R2 117 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 IFITM1P13164 125 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 Q8TAT8 98 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 RNF5Q99942 180 aa8.24□□□□□ -1.09
SIK3-210ENST00000480468 CD59P13987 128 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 TDHQ8IZJ6 230 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 FREM2Q5SZK8 3169 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 IGHV1-8P0DP01 117 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 TMEM155Q4W5P6 130 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 PRR30Q53SZ7 412 aaPredicted RBP8.23□□□□□ -1.09
SIK3-210ENST00000480468 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
SIK3-210ENST00000480468 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 NDUFB3O43676 98 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 ERCC8Q13216 396 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 TNFRSF18Q9Y5U5 241 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 URB1O60287 2271 aaKnown RBP8.22□□□□□ -1.09
SIK3-210ENST00000480468 RBAKDNA6NC62 111 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 SLC25A20O43772 301 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 TRGV3P03979 118 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 ASCL5Q7RTU5 278 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 SLC50A1Q9BRV3 221 aa8.22□□□□□ -1.09
SIK3-210ENST00000480468 IGHV1-3A0A0C4DH29 117 aa8.21□□□□□ -1.09
SIK3-210ENST00000480468 A0A0J9YY99 117 aa8.21□□□□□ -1.09
SIK3-210ENST00000480468 LOXP28300 417 aaPredicted RBP8.21□□□□□ -1.09
SIK3-210ENST00000480468 SFTA2Q6UW10 78 aa8.21□□□□□ -1.09
SIK3-210ENST00000480468 VKORC1Q9BQB6 163 aa8.21□□□□□ -1.09
SIK3-210ENST00000480468 EYSQ5T1H1 3165 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 H3BVH4 76 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 CFC1P0CG37 223 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 GFRALQ6UXV0 394 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 RASL10AQ92737 203 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 PRO1854Q9UHT4 67 aa8.21□□□□□ -1.1
SIK3-210ENST00000480468 PLCE1Q9P212 2302 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 TRAV8-2A0A0B4J237 113 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 IGLV1-47P01700 117 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
SIK3-210ENST00000480468 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 CFHR4Q92496 578 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 CTSZQ9UBR2 303 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 SIT1Q9Y3P8 196 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 PRUNE2Q8WUY3 3088 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 MALRD1Q5VYJ5 2156 aa8.2□□□□□ -1.1
SIK3-210ENST00000480468 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
SIK3-210ENST00000480468 MFAP4P55083 255 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 OR10J6PQ8NGY7 276 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 A0A1W2PNU3 283 aaPredicted RBP8.19□□□□□ -1.1
SIK3-210ENST00000480468 TMEM178BH3BS89 294 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 P0DMU3 169 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 HERVK_113P61574 105 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 NUP37Q8NFH4 326 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 IGFBPL1Q8WX77 278 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 KAAG1Q9UBP8 84 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 SMAD5-AS1Q9Y6J3 95 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 VPS13AQ96RL7 3174 aa8.19□□□□□ -1.1
SIK3-210ENST00000480468 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
SIK3-210ENST00000480468 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
SIK3-210ENST00000480468 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
SIK3-210ENST00000480468 CNIH1O95406 144 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 CCL8P80075 99 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 DYNAPQ8N1N2 210 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
SIK3-210ENST00000480468 MDFICQ9P1T7 246 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 ONECUT1Q9UBC0 465 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 C17orf100A8MU93 164 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 C9JAW5 83 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 CRLF1O75462 422 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 PRTN3P24158 256 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 SUMO2P61956 95 aaKnown RBP8.18□□□□□ -1.1
SIK3-210ENST00000480468 Q8N1Y9 231 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 PRSS33Q8NF86 280 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
SIK3-210ENST00000480468 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
SIK3-210ENST00000480468 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms