RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 NDFIP1Q9BT67 221 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 SLC25A2Q9BXI2 301 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 AGPAT4-IT1Q9H0P7 198 aa4.93□□□□□ -1.62
COL17A1-205ENST00000480127 K7EQM0 130 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 PSCAO43653 123 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 UPK1BO75841 260 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 NXPH4O95158 308 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 HOXA5P20719 270 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 PPT1P50897 306 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 TCL1AP56279 114 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ERVFC1-1P60608 527 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 MRPL23Q16540 153 aaKnown RBP4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ESRGQ1W209 222 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ACOT6Q3I5F7 207 aaPredicted RBP4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ANXA2RQ3ZCQ2 193 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ZFP69Q49AA0 526 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 C9orf47Q6ZRZ4 202 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 PPP1R1CQ8WVI7 109 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 PHYHIPLQ96FC7 376 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 ST6GAL2Q96JF0 529 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 WDR61Q9GZS3 305 aaKnown RBP4.92□□□□□ -1.62
COL17A1-205ENST00000480127 Q9H3A6 140 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 OR5AC2Q9NZP5 309 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 PRO0255Q9UI72 69 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 HHLA3Q9XRX5 114 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 MRPS16Q9Y3D3 137 aaKnown RBP4.92□□□□□ -1.62
COL17A1-205ENST00000480127 KLF12Q9Y4X4 402 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
COL17A1-205ENST00000480127 A0A1W2PPQ1 181 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 KLLNB2CW77 178 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 H3BNG1 76 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 NDUFB4O95168 129 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 NMBP08949 121 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 EVI2AP22794 236 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 RPL12P30050 165 aaKnown RBP4.91□□□□□ -1.62
COL17A1-205ENST00000480127 KRTAP10-2P60368 255 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 IBA57Q5T440 356 aaKnown RBP4.91□□□□□ -1.62
COL17A1-205ENST00000480127 NEGR1Q7Z3B1 354 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 NFE4Q86UQ8 179 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 OR4C5Q8NGB2 326 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 CHAC2Q8WUX2 184 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 TXNDC17Q9BRA2 123 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 ZNF492Q9P255 531 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 MBD2Q9UBB5 411 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 TP53TG3Q9ULZ0 132 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 LY96Q9Y6Y9 160 aa4.91□□□□□ -1.62
COL17A1-205ENST00000480127 PGPA6NDG6 321 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 EPM2AB3EWF7 344 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 C9JCJ5 164 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 SFTA3P0C7M3 94 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 GYPEP15421 78 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 CRISP2P16562 243 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 LINC00315P59091 139 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 GOLT1AQ6ZVE7 132 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 LYPD1Q8N2G4 141 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 SPXQ9BT56 116 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 SDF2L1Q9HCN8 221 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 HSPB11Q9Y547 144 aa4.9□□□□□ -1.63
COL17A1-205ENST00000480127 TRAV21A0A0B4J279 112 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 RBAKDNA6NC62 111 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 F6UZH7 168 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 HMGB3O15347 200 aaKnown RBP4.89□□□□□ -1.63
COL17A1-205ENST00000480127 SPINK4O60575 86 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 ZNF324O75467 553 aaPredicted RBP4.89□□□□□ -1.63
COL17A1-205ENST00000480127 MPC2O95563 127 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 ORM1P02763 201 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 INAFM2P0DMQ5 153 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 ZNF266Q14584 549 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 LINC00299Q6ZSB3 139 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 ZFAND2AQ8N6M9 145 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 LINC00612Q8N6U2 182 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 HSD17B11Q8NBQ5 300 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 C11orf72Q8NBR9 251 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 OR10G4Q8NGN3 311 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 OR10G9Q8NGN4 311 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 OR10G7Q8NGN6 311 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 FXYD5Q96DB9 178 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 KCNS1Q96KK3 526 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 FAM167A-AS1Q96KT0 104 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 LINC00467Q9BRT7 94 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 UPK3BQ9BT76 320 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 TREM1Q9NP99 234 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 OTORQ9NRC9 128 aa4.89□□□□□ -1.63
COL17A1-205ENST00000480127 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
COL17A1-205ENST00000480127 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 TRBV7-9A0A0J9YWB2 115 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 DIRC3C9JPN6 131 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 EIF3GO75821 320 aaKnown RBP eCLIP4.88□□□□□ -1.63
COL17A1-205ENST00000480127 IFNA7P01567 189 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 CRYGDP07320 174 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 S100A4P26447 101 aaKnown RBP4.88□□□□□ -1.63
COL17A1-205ENST00000480127 CDC34P49427 236 aaPredicted RBP4.88□□□□□ -1.63
COL17A1-205ENST00000480127 CRYBA4P53673 196 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 H2BFSP57053 126 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 OR10J3Q5JRS4 329 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 PRR9Q5T870 116 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 SH2D6Q7Z4S9 175 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms