RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 Q8TAT8 98 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 RAB2BQ8WUD1 216 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 BAALCQ8WXS3 180 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 SCGB3A2Q96PL1 93 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 MGST2Q99735 147 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 SOSTQ9BQB4 213 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 VCX3AQ9NNX9 186 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
GPNMB-211ENST00000479625 CTDSP2O14595 271 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 ATP6V1G2O95670 118 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 ARL16Q0P5N6 197 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 IL18Q14116 193 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 LAGE3Q14657 143 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 PXDC1Q5TGL8 231 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 MRPL53Q96EL3 112 aaKnown RBP6.33□□□□□ -1.4
GPNMB-211ENST00000479625 MGAT4CQ9UBM8 478 aa6.33□□□□□ -1.4
GPNMB-211ENST00000479625 LPAP08519 4548 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TRBV19A0A075B6N1 114 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TRAV8-6A0A0B4J262 113 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TRAV4A0A0B4J268 109 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 RBFOX3A6NFN3 312 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 NDUFB4O95168 129 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TNFSF8P32971 234 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TIRAPP58753 221 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 PPP1R1AQ13522 171 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 ODF1Q14990 250 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 GUK1Q16774 197 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TMEM128Q5BJH2 165 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TMEM14EPQ6UXP3 125 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 LINC00477Q96M19 166 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 TM2D2Q9BX73 214 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 SRRQ9GZT4 340 aa6.32□□□□□ -1.4
GPNMB-211ENST00000479625 A0A087WXM4 84 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 FNDC10F2Z333 226 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 CTDSPLO15194 276 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 ZNF253O75346 499 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 SFT2D2O95562 160 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 PYYP10082 97 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 CTF1Q16619 201 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 TMEM183BQ1AE95 376 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 C4orf46Q504U0 113 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 TMEM78Q5T7P6 136 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 FAM122CQ6P4D5 195 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 TMEM183AQ8IXX5 376 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 OR4C5Q8NGB2 326 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 RASL10AQ92737 203 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
GPNMB-211ENST00000479625 SCGB1D2O95969 90 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 ASAH1Q13510 395 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
GPNMB-211ENST00000479625 MIC13Q5XKP0 118 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
GPNMB-211ENST00000479625 SMIM8Q96KF7 97 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
GPNMB-211ENST00000479625 ZNF492Q9P255 531 aa6.3□□□□□ -1.4
GPNMB-211ENST00000479625 NMBP08949 121 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 GATA1P15976 413 aaPredicted RBP6.29□□□□□ -1.4
GPNMB-211ENST00000479625 CAMLGP49069 296 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 UBE2MP61081 183 aaKnown RBP6.29□□□□□ -1.4
GPNMB-211ENST00000479625 TDRG1Q3Y452 100 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 LELP1Q5T871 98 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 SH2D6Q7Z4S9 175 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 SLC25A29Q8N8R3 303 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 DIRAS2Q96HU8 199 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 NAGKQ9UJ70 344 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 PRELID1Q9Y255 219 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 TIMM9Q9Y5J7 89 aa6.29□□□□□ -1.4
GPNMB-211ENST00000479625 HIST1H1EP10412 219 aaKnown RBP6.28□□□□□ -1.4
GPNMB-211ENST00000479625 BAK1Q16611 211 aa6.28□□□□□ -1.4
GPNMB-211ENST00000479625 NRARPQ7Z6K4 114 aa6.28□□□□□ -1.4
GPNMB-211ENST00000479625 SPXQ9BT56 116 aa6.28□□□□□ -1.4
GPNMB-211ENST00000479625 RPH3ALQ9UNE2 315 aa6.28□□□□□ -1.4
GPNMB-211ENST00000479625 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 TSC22D2O75157 780 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 PFN1P07737 140 aaKnown RBP6.27□□□□□ -1.41
GPNMB-211ENST00000479625 ZNF138P52744 262 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 ZNF266Q14584 549 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 Q6ZRG5 221 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 OR1L4Q8NGR5 311 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 ATP6V0E2Q8NHE4 81 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 MCFD2Q8NI22 146 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 PFDN5Q99471 154 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
GPNMB-211ENST00000479625 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 IGHV3-73A0A0B4J1V6 119 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 RNF222A6NCQ9 220 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 C5orf51A6NDU8 294 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
GPNMB-211ENST00000479625 M0R2P5 195 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 GNRH2O43555 120 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 CAV2P51636 162 aa6.26□□□□□ -1.41
GPNMB-211ENST00000479625 PDE6HQ13956 83 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms