RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TRAV8-1A0A0A6YYK1 113 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 A0A1B0GUT8 65 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 SH2D7A6NKC9 451 aaPredicted RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 A6NNC1 897 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 NCBP2LA6PVI3 153 aaKnown RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 TCAPO15273 167 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 LY6HO94772 140 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 IGLC3P0DOY3 106 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 ARL3P36405 182 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 RAB9AP51151 201 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 RPS20P60866 119 aaKnown RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 KLK9Q2XQG4 91 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 TDRG1Q3Y452 100 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 COX8CQ7Z4L0 72 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 FAM110DQ8TAY7 271 aaPredicted RBP3.84□□□□□ -1.79
SF3B6-202ENST00000478050 ZC2HC1AQ96GY0 325 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 FOXC2Q99958 501 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 RABAC1Q9UI14 185 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 KLK9Q9UKQ9 250 aa3.84□□□□□ -1.79
SF3B6-202ENST00000478050 SONP18583 2426 aaKnown RBP3.84□□□□□ -1.8
SF3B6-202ENST00000478050 TRAV9-2A0A087WT02 112 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 IGHV7-81A0A0B4J1V7 117 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 IGHV2-70DA0A0C4DH43 119 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 A0A1W2PRD5 423 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 A0A1W2PRF3 423 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 A0A1W2PRM7 423 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 C2orf70A6NJV1 201 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 NDUFB8O95169 186 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 LEPROTL1O95214 131 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 LINC00614P0C842 121 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 FAM106CPP0CH98 169 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 GATA3P23771 443 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 CD24P25063 80 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 PCP4P48539 62 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 UBE2E1P51965 193 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 HNRNPA3P51991 378 aaKnown RBP3.83□□□□□ -1.8
SF3B6-202ENST00000478050 EFNA4P52798 201 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 NDPQ00604 133 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 KLF17Q5JT82 389 aaPredicted RBP3.83□□□□□ -1.8
SF3B6-202ENST00000478050 SAPCD1Q5SSQ6 148 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 EBLN2Q6P2I7 272 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 DYNAPQ8N1N2 210 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 Q8N9W7 124 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
SF3B6-202ENST00000478050 URB1-AS1Q96HZ7 61 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 TMEM70Q9BUB7 260 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 LPAR2Q9HBW0 351 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
SF3B6-202ENST00000478050 A0A087X0K7 114 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 IGHV1-24A0A0C4DH33 117 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 M0R3E3 92 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
SF3B6-202ENST00000478050 SH2D1AO60880 128 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 ARMS2P0C7Q2 107 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 EGR2P11161 476 aaPredicted RBP3.82□□□□□ -1.8
SF3B6-202ENST00000478050 ZFP36P26651 326 aaKnown RBP3.82□□□□□ -1.8
SF3B6-202ENST00000478050 BMI1P35226 326 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 COL5A1-AS1Q5SY13 56 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 FAM120AOSQ5T036 256 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 PET117Q6UWS5 81 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 Q6ZN92 141 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF493Q6ZR52 646 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 ATP6V0BQ99437 205 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 SMR3AQ99954 134 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 MAP1LC3CQ9BXW4 147 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 TMEM191AQ9H0A3 160 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 UBTD1Q9HAC8 227 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 ST20Q9HBF5 79 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 HSPB8Q9UJY1 196 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 MRPS16Q9Y3D3 137 aaKnown RBP3.82□□□□□ -1.8
SF3B6-202ENST00000478050 S4R3C0 116 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 NBEAL2Q6ZNJ1 2754 aa3.82□□□□□ -1.8
SF3B6-202ENST00000478050 RBAKDNA6NC62 111 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 OR2T8A6NH00 312 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 OR4C46A6NHA9 309 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 SYS1-DBNDD2H3BUS1 97 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 SPRY2O43597 315 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 GOSR1O95249 250 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 CTSGP08311 255 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF25P17030 456 aaPredicted RBP3.81□□□□□ -1.8
SF3B6-202ENST00000478050 TSPOP30536 169 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 CRIP1P50238 77 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
SF3B6-202ENST00000478050 GAGE1Q13065 139 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 LCN12Q6JVE5 192 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 UNQ5815/PRO19632Q6UWF5 114 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 FA2HQ7L5A8 372 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 OR10AG1Q8NH19 301 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 ZNF502Q8TBZ5 544 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 EEF1AKMT3Q96AZ1 226 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 PRR25Q96S07 402 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 SLC50A1Q9BRV3 221 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
SF3B6-202ENST00000478050 LAMTOR2Q9Y2Q5 125 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms