RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 MUC21A0A0G2JKD1 596 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 MUC21A0A140T8X8 626 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 SMIM17P0DL12 118 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 TWIST1Q15672 202 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 ACTL10Q5JWF8 245 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 MYOZ3Q8TDC0 251 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 GNB1LQ9BYB4 327 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 PHLDA3Q9Y5J5 127 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 F8P00451 2351 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 NOTCH3Q9UM47 2321 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 TRAV8-2A0A0B4J237 113 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 RASL11AQ6T310 242 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 LYZL1Q6UWQ5 148 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 RNF152Q8N8N0 203 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 FABP4P15090 132 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 NTF3P20783 257 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
RGPD5-209ENST00000477523 SSBP4Q9BWG4 385 aaPredicted RBP3.45□□□□□ -1.86
RGPD5-209ENST00000477523 C16orf95Q9H693 158 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 CSN3P07498 182 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 FOXA3P55318 350 aaPredicted RBP3.45□□□□□ -1.86
RGPD5-209ENST00000477523 FOXI2Q6ZQN5 318 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 SMIM27A0A1W2PRY6 76 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 K7EQG2 157 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 AMTP48728 403 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 C9orf47Q6ZRZ4 202 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 HRNRQ86YZ3 2850 aaPredicted RBP3.44□□□□□ -1.86
RGPD5-209ENST00000477523 C19orf71A6NCJ1 209 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 F2Z2F3 143 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 F5H697 171 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 M0R381 172 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 IGLV2-11P01706 119 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 PMCHP20382 165 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 C18orf65Q6ZTR6 163 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 FA2HQ7L5A8 372 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 STHQ8IWL8 128 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 PRSS3P2Q8NHM4 247 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 H3BVH4 76 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 TRAV25A0A0B4J276 109 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 ARMS2P0C7Q2 107 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 SRSF2Q01130 221 aaKnown RBP3.44□□□□□ -1.86
RGPD5-209ENST00000477523 TRBV7-9A0A0J9YWB2 115 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 CD7P09564 240 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 CDKN1BP46527 198 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 DEFB1P60022 68 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 C2CD3Q4AC94 2353 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 TRAV12-3A0A0B4J271 114 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 KNCNA6PVL3 124 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 NPIPB6E9PJ23 425 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 TMEM136Q6ZRR5 245 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 SYT8Q8NBV8 401 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 OR10D4PQ8NGN7 298 aa3.44□□□□□ -1.86
RGPD5-209ENST00000477523 TRGV11A0A075B6L2 103 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 A0A0J9YX75 114 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 CKS2P33552 79 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 S100A12P80511 92 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 SPINK13Q1W4C9 94 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 LINC01559Q495D7 138 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 NDUFA11Q86Y39 141 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 C3orf56Q8N813 242 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 PACRGQ96M98 296 aaPredicted RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 ITPR2Q14571 2701 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 C7orf71A4D174 169 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 CBY3A6NI87 242 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 M0R2Z0 102 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 CD300EQ496F6 205 aaPredicted RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 LINC00322Q6ZN03 302 aaPredicted RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 DSCAML1Q8TD84 2053 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 MGPP08493 103 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 CACNG7P62955 275 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 LINC01587Q99440 93 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 INSP01308 110 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 PROK1P58294 105 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 C20orf173Q96LM9 149 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 MCRIP2Q9BUT9 160 aaKnown RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 FN1P02751 2386 aaKnown RBP3.43□□□□□ -1.86
RGPD5-209ENST00000477523 TRAV2A0A0B4J234 112 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 EDN2P20800 178 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 PRR31Q5SQ13 230 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 HIST2H2BDQ6DRA6 164 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 C12orf54Q6X4T0 127 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 PRELID3AQ96N28 172 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 ATRQ13535 2644 aa3.43□□□□□ -1.86
RGPD5-209ENST00000477523 HOXA5P20719 270 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 ZNF80P51504 273 aaPredicted RBP3.42□□□□□ -1.86
RGPD5-209ENST00000477523 ANXA2RQ3ZCQ2 193 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 WIPF2Q8TF74 440 aaPredicted RBP3.42□□□□□ -1.86
RGPD5-209ENST00000477523 APCP25054 2843 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 C20orf202A1L168 122 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 SCGB1D1O95968 90 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 AP1S3Q96PC3 154 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 TACC2O95359 2948 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 AMBPP02760 352 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 PPBPP02775 128 aa3.42□□□□□ -1.86
RGPD5-209ENST00000477523 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms