RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 MAST4O15021 2626 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 FAM135BQ49AJ0 1406 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 BCORL1Q5H9F3 1711 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
LTN1-204ENST00000475344 A0A1B0GV72 72 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 E7EQ34 232 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 M0QZK8 103 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 PGRMC1O00264 195 aaKnown RBP0.35□□□□□ -2.35
LTN1-204ENST00000475344 IFNA21P01568 189 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 SAA1P0DJI8 122 aaPredicted RBP0.35□□□□□ -2.35
LTN1-204ENST00000475344 NEFHP12036 1026 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 ZNF137PP52743 207 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 C6orf52Q5T4I8 152 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 C10orf111Q8N326 155 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 TMEM229BQ8NBD8 167 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 MORN4Q8NDC4 146 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 SMR3AQ99954 134 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 LXNQ9BS40 222 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 CBLN4Q9NTU7 201 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 DSPPQ9NZW4 1301 aa0.35□□□□□ -2.35
LTN1-204ENST00000475344 TRBV7-6A0A0J9YX20 115 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 LOC107984640A0A0U1RRK4 108 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 PFDN1O60925 122 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 IGF2RP11717 2491 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 SLC25A4P12235 298 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 CRYGSP22914 178 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 RPS3P23396 243 aaKnown RBP eCLIP0.34□□□□□ -2.36
LTN1-204ENST00000475344 SPINK7P58062 85 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 TMEM128Q5BJH2 165 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 IZUMO2Q6UXV1 221 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 FGD6Q6ZV73 1430 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 OR51A4Q8NGJ6 313 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 CCDC115Q96NT0 180 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
LTN1-204ENST00000475344 CENPHQ9H3R5 247 aa0.34□□□□□ -2.36
LTN1-204ENST00000475344 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
LTN1-204ENST00000475344 A0A1W2PPB8 328 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 A0A1W2PRS3 328 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 KIR3DP1A8MWS1 328 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 SULT1C4O75897 302 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 FAM107AO95990 144 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 SNRPD3P62318 126 aaKnown RBP0.33□□□□□ -2.36
LTN1-204ENST00000475344 BLCAPP62952 87 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 TCTEX1D1Q8N7M0 179 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 BRK1Q8WUW1 75 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 LINC00208Q96KT6 92 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 COMMD3Q9UBI1 195 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 MPC1Q9Y5U8 109 aa0.33□□□□□ -2.36
LTN1-204ENST00000475344 JMJD1CQ15652 2540 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 CACNA1HO95180 2353 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 LOC107986453A0A1B0GWG9 222 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 ARL5CA6NH57 179 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 BBIP1A8MTZ0 92 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 CDC42EP2O14613 210 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 LY6G6CO95867 125 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 KDELR1P24390 212 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 TFAMQ00059 246 aaKnown RBP0.32□□□□□ -2.36
LTN1-204ENST00000475344 OR9Q1Q8NGQ5 310 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 AP1S3Q96PC3 154 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 KRTAP2-1Q9BYU5 128 aa0.32□□□□□ -2.36
LTN1-204ENST00000475344 A2MP01023 1474 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 LOC101927531A0A1B0GV80 90 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 HBDP02042 147 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 GYPBP06028 91 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 RPL22P35268 128 aaKnown RBP0.31□□□□□ -2.36
LTN1-204ENST00000475344 GTF2A1P52655 376 aaPredicted RBP0.31□□□□□ -2.36
LTN1-204ENST00000475344 CAV3P56539 151 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 GLYATL3Q5SZD4 288 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 SAMD13Q5VXD3 122 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 C10orf99Q6UWK7 81 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 TOMM20LQ6UXN7 152 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 C3orf62Q6ZUJ4 267 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 NAT14Q8WUY8 206 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 SELENOSQ9BQE4 189 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 DDA1Q9BW61 102 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 MRPL36Q9P0J6 103 aaKnown RBP0.31□□□□□ -2.36
LTN1-204ENST00000475344 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
LTN1-204ENST00000475344 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
LTN1-204ENST00000475344 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
LTN1-204ENST00000475344 NBDYA0A0U1RRE5 68 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 PRORSD1PA6NEY8 169 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 EDF1O60869 148 aaKnown RBP0.3□□□□□ -2.36
LTN1-204ENST00000475344 IGKCP01834 107 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 SLC25A5P05141 298 aaKnown RBP0.3□□□□□ -2.36
LTN1-204ENST00000475344 S100GP29377 79 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 SRP9P49458 86 aaKnown RBP0.3□□□□□ -2.36
LTN1-204ENST00000475344 DNAJB13P59910 316 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 ZNF56Q15929 161 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 SMIM15Q7Z3B0 74 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 TMEM35BQ8NCS4 154 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 NDUFAF1Q9Y375 327 aa0.3□□□□□ -2.36
LTN1-204ENST00000475344 KIAA0100Q14667 2235 aaKnown RBP0.29□□□□□ -2.36
LTN1-204ENST00000475344 TMEM30CPA0ZSE6 113 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 TMEM189A5PLL7 270 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms