RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
SEC61A2-213ENST00000475268 CDPF1Q6NVV7 123 aa13.84□□□□□ -0.19
SEC61A2-213ENST00000475268 REC114Q7Z4M0 266 aa13.84□□□□□ -0.19
SEC61A2-213ENST00000475268 C18orf32Q8TCD1 76 aa13.84□□□□□ -0.19
SEC61A2-213ENST00000475268 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 ESDP10768 282 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 MUC21Q5SSG8 566 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 PPP1R14DQ9NXH3 145 aa13.83□□□□□ -0.19
SEC61A2-213ENST00000475268 F6UB75 175 aa13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 LGALS9O00182 355 aa13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 SRSF2Q01130 221 aaKnown RBP13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 LINC00477Q96M19 166 aa13.83□□□□□ -0.2
SEC61A2-213ENST00000475268 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 FER1L6-AS1Q8NA97 138 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 A0A1B0GW15 77 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 TFPI2P48307 235 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 DCANP1Q8TF63 244 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
SEC61A2-213ENST00000475268 LOC102724200A0A096LPH7 203 aaPredicted RBP13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 J3KRW8 73 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 ID1P41134 155 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 PAFAH1B2P68402 229 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 LINC01559Q495D7 138 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 OR8A1Q8NGG7 326 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 SLURP1P55000 103 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 KLF5Q13887 457 aaPredicted RBP13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 JOSD1Q15040 202 aaPredicted RBP13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 C11orf21Q9P2W6 132 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
SEC61A2-213ENST00000475268 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
SEC61A2-213ENST00000475268 Q6ZQT7 251 aa13.8□□□□□ -0.2
SEC61A2-213ENST00000475268 KCNS1Q96KK3 526 aa13.8□□□□□ -0.2
SEC61A2-213ENST00000475268 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 C2orf70A6NJV1 201 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 CTRLP40313 264 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 PRR9Q5T870 116 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 CUBNO60494 3623 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 DUX3Q96PT4 197 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 SMR3AQ99954 134 aa13.79□□□□□ -0.2
SEC61A2-213ENST00000475268 LINC01619G3V211 115 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 DPF1Q92782 380 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 GPX1P07203 203 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 PMCHP20382 165 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 TWIST1Q15672 202 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 ZFAND2AQ8N6M9 145 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
SEC61A2-213ENST00000475268 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
SEC61A2-213ENST00000475268 M0QZ24 198 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 NTF3P20783 257 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 AMTP48728 403 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 SCGB2A2Q13296 93 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 ZNF493Q6ZR52 646 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 GSN-AS1Q9NRJ2 163 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 CD33P20138 364 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 PSMG4Q5JS54 123 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 RNASEKQ6P5S7 137 aaKnown RBP13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 Q6ZWC4 215 aa13.76□□□□□ -0.21
SEC61A2-213ENST00000475268 ZNF324O75467 553 aaPredicted RBP13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 NF1P21359 2839 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 FAM19A4Q96LR4 140 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 K7EQG2 157 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 ADAMTSL5Q6ZMM2 481 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 NIT1Q86X76 327 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 NAGKQ9UJ70 344 aa13.75□□□□□ -0.21
SEC61A2-213ENST00000475268 SCGB1D1O95968 90 aa13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 RNASE1P07998 156 aaKnown RBP13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 RNASE4P34096 147 aaKnown RBP13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 AMN1Q8IY45 258 aa13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 MSRB1Q9NZV6 116 aa13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 MTORP42345 2549 aa13.74□□□□□ -0.21
SEC61A2-213ENST00000475268 HSBP1O75506 76 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 DNLZQ5SXM8 178 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 TRAV21A0A0B4J279 112 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 KIR3DS1Q14943 382 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 CNFNQ9BYD5 112 aa13.73□□□□□ -0.21
SEC61A2-213ENST00000475268 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 URB1-AS1Q96HZ7 61 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 PEMTQ9UBM1 199 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 S100A12P80511 92 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 DLX4Q92988 240 aaPredicted RBP13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 TMEM160Q9NX00 188 aa13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 ANK3Q12955 4377 aaKnown RBP13.72□□□□□ -0.21
SEC61A2-213ENST00000475268 NOTCH2Q04721 2471 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms