RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 ZNF138P52744 262 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 LINC00310P59036 64 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 IQCJQ1A5X6 159 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 CDPF1Q6NVV7 123 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 RBPMS2Q6ZRY4 209 aaKnown RBP4.69□□□□□ -1.66
CLK1-210ENST00000473565 ZNF575Q86XF7 245 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 LINC00518Q8N0U6 118 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 TEX29Q8N6K0 151 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 MS4A6AQ9H2W1 248 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 APCSP02743 223 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 CRISP2P16562 243 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 S100A2P29034 98 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 CT83Q5H943 113 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 DCANP1Q8TF63 244 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 DLX4Q92988 240 aaPredicted RBP4.69□□□□□ -1.66
CLK1-210ENST00000473565 C12orf57Q99622 126 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 HIST1H2BLQ99880 126 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 AMBPP02760 352 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 KLF5Q13887 457 aaPredicted RBP4.68□□□□□ -1.66
CLK1-210ENST00000473565 PSMG4Q5JS54 123 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 LYZL1Q6UWQ5 148 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 OR4B1Q8NGF8 309 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 OR1N2Q8NGR9 330 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 LINC01006Q8NI28 216 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 DPF1Q92782 380 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 RCHY1Q96PM5 261 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 CITED2Q99967 270 aaPredicted RBP4.68□□□□□ -1.66
CLK1-210ENST00000473565 LINC01619G3V211 115 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 M0QZ24 198 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 MEOX2P50222 304 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 HBBP68871 147 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 NAGKQ9UJ70 344 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 RBAKDNA6NC62 111 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 PCP4L1A6NKN8 68 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 A8MWP6 167 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 SERF1AO75920 110 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 RNASE1P07998 156 aaKnown RBP4.68□□□□□ -1.66
CLK1-210ENST00000473565 ZNF124Q15973 351 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 REC114Q7Z4M0 266 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 ARL6IP6Q8N6S5 226 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 OR8A1Q8NGG7 326 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 OR10J6PQ8NGY7 276 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 ZNF418Q8TF45 676 aaPredicted RBP4.68□□□□□ -1.66
CLK1-210ENST00000473565 MRPL53Q96EL3 112 aaKnown RBP4.68□□□□□ -1.66
CLK1-210ENST00000473565 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
CLK1-210ENST00000473565 A0A1B0GUT8 65 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 FABP5P3A8MUU1 101 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 MT-ND6P03923 174 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 HILS1P60008 231 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 COX8CQ7Z4L0 72 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 C4orf3Q8WVX3 66 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 RAX2Q96IS3 184 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 PACRGQ96M98 296 aaPredicted RBP4.67□□□□□ -1.66
CLK1-210ENST00000473565 GFRA4Q9GZZ7 299 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 TIMM8BQ9Y5J9 83 aaPredicted RBP4.67□□□□□ -1.66
CLK1-210ENST00000473565 COA6Q5JTJ3 125 aaKnown RBP4.67□□□□□ -1.66
CLK1-210ENST00000473565 ZFAND2AQ8N6M9 145 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 LGALS9O00182 355 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 RNASE4P34096 147 aaKnown RBP4.67□□□□□ -1.66
CLK1-210ENST00000473565 BMI1P35226 326 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 PYY3Q5JQD4 70 aa4.67□□□□□ -1.66
CLK1-210ENST00000473565 FBLL1A6NHQ2 334 aaKnown RBP4.66□□□□□ -1.66
CLK1-210ENST00000473565 K7EQG2 157 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 OVOL1O14753 267 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 ATP5L2Q7Z4Y8 100 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 TMEM61Q8N0U2 210 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 FER1L6-AS1Q8NA97 138 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 OR9G4Q8NGQ1 327 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 C18orf32Q8TCD1 76 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 FAM231BA6NCW3 169 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 S100A8P05109 93 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 GPX1P07203 203 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 ALKBH7Q9BT30 221 aaPredicted RBP4.66□□□□□ -1.66
CLK1-210ENST00000473565 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
CLK1-210ENST00000473565 KNCNA6PVL3 124 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 M0R2Z0 102 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 CSN3P07498 182 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 IGLC6P0CF74 106 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 PMCHP20382 165 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 NTF3P20783 257 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 ID1P41134 155 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 FXYD7P58549 80 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 RIGQ13278 110 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 TWIST1Q15672 202 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 NSUN5P1Q3KNT7 163 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 COX19Q49B96 90 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 RASL11AQ6T310 242 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 AMN1Q8IY45 258 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 FAM19A2Q8N3H0 131 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 LINC00477Q96M19 166 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms