RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 GABARAPH6UMI1 98 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 SPINK1P00995 79 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 GYPBP06028 91 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 NDUFA6P56556 154 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 C3orf62Q6ZUJ4 267 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 TMEM229BQ8NBD8 167 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 MCEEQ96PE7 176 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 PROK2Q9HC23 129 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 KDM6BO15054 1643 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 ABCA2Q9BZC7 2435 aa-0.18□□□□□ -2.44
COMMD3-211ENST00000472673 FGD6Q6ZV73 1430 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 KIAA1549LQ6ZVL6 1849 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 TRDV1A0A1B0GX56 115 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 ARL5CA6NH57 179 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 H7BYZ3 331 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 CDC42EP2O14613 210 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 E2F6O75461 281 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 IGKCP01834 107 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 TPT1P13693 172 aaKnown RBP-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 IQCJQ1A5X6 159 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 IZUMO2Q6UXV1 221 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 FAM24BQ8N5W8 94 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 TEX29Q8N6K0 151 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 TCTEX1D1Q8N7M0 179 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 AP3S1Q92572 193 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 PRELID3AQ96N28 172 aa-0.19□□□□□ -2.44
COMMD3-211ENST00000472673 AFDNP55196 1824 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 WNK2Q9Y3S1 2297 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 ZNF292O60281 2723 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 TRAPPC8Q9Y2L5 1435 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 USP54Q70EL1 1684 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 IL7P13232 177 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 MAXP61244 160 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 Q5BKY6 102 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 TMED4Q7Z7H5 227 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 STX19Q8N4C7 294 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 HOPXQ9BPY8 73 aaPredicted RBP-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 MRPL35Q9NZE8 188 aaKnown RBP-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 NUBP2Q9Y5Y2 271 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 ANKRD31Q8N7Z5 1873 aa-0.2□□□□□ -2.44
COMMD3-211ENST00000472673 ADGBQ8N7X0 1667 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 SPAG17Q6Q759 2223 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 DLC1Q96QB1 1528 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 HIGD1CA8MV81 97 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 IGF2P01344 180 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 BCL2P10415 239 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 SDC2P34741 201 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 BASP1P80723 227 aaKnown RBP-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 MRPS15P82914 257 aaKnown RBP-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 LYPD5Q6UWN5 251 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 VMO1Q7Z5L0 202 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 DEFB132Q7Z7B7 95 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 STOML2Q9UJZ1 356 aa-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 NUP210Q8TEM1 1887 aaPredicted RBP-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.21□□□□□ -2.44
COMMD3-211ENST00000472673 ABCA4P78363 2273 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 TMEM30CPA0ZSE6 113 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 TPST1O60507 370 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 EDF1O60869 148 aaKnown RBP-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 SAA1P0DJI8 122 aaPredicted RBP-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 S100A11P31949 105 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 GTF2A1P52655 376 aaPredicted RBP-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 TCTAP57738 103 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 LINC00305Q7Z4B0 112 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 OR8J3Q8NGG0 315 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 ISOC1Q96CN7 298 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 BIN3Q9NQY0 253 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 GID8Q9NWU2 228 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 LAMTOR3Q9UHA4 124 aa-0.22□□□□□ -2.44
COMMD3-211ENST00000472673 CADP27708 2225 aa-0.22□□□□□ -2.45
COMMD3-211ENST00000472673 MED13LQ71F56 2210 aa-0.22□□□□□ -2.45
COMMD3-211ENST00000472673 TANC1Q9C0D5 1861 aa-0.22□□□□□ -2.45
COMMD3-211ENST00000472673 KMT2AQ03164 3969 aa-0.22□□□□□ -2.45
COMMD3-211ENST00000472673 F5P12259 2224 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 LOC107986453A0A1B0GWG9 222 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 SLC25A4P12235 298 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 CRYBA4P53673 196 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 DNAJB13P59910 316 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 C3orf33Q6P1S2 294 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 DCUN1D2Q6PH85 259 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 HRCT1Q6UXD1 115 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 TMEM14BQ9NUH8 114 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 MPC1Q9Y5U8 109 aa-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 TCOF1Q13428 1488 aaKnown RBP-0.23□□□□□ -2.45
COMMD3-211ENST00000472673 FLNAP21333 2647 aaKnown RBP-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 TRAV13-1A0A0B4J241 112 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 A0A0G2JMM0 328 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 TRBV27A0A0K0K1C4 114 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 TMEM189A5PLL7 270 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 MAP1LC3B2A6NCE7 125 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 MPC1LP0DKB6 136 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 SERPINB1P30740 379 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 BLCAPP62952 87 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 CPDO75976 1380 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 FAM135BQ49AJ0 1406 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 NCOR1O75376 2440 aa-0.24□□□□□ -2.45
COMMD3-211ENST00000472673 A0A096LNT2 108 aa-0.25□□□□□ -2.45
COMMD3-211ENST00000472673 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms