RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CLEC2BQ92478 149 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 PPP1R14BQ96C90 147 aa-1.29□□□□□ -2.62
PRPF40A-207ENST00000471701 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 A0A0G2JMM0 328 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 TMEM30CPA0ZSE6 113 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 RIIAD1A6NNX1 92 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 G3V2T6 193 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 H7BYZ3 331 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 SPA17Q15506 151 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 LYPD5Q6UWN5 251 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 PRNDQ9UKY0 176 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 SLC22A13Q9Y226 551 aa-1.3□□□□□ -2.62
PRPF40A-207ENST00000471701 ARL5CA6NH57 179 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 TPST1O60507 370 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 IL7P13232 177 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 CAPZBP47756 277 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 MRPS36P82909 103 aaKnown RBP-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 IQCJQ1A5X6 159 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 SCGB2B2Q4G0G5 96 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 DIRC1Q969H9 104 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 ARMC1Q9NVT9 282 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 FAT2Q9NYQ8 4349 aa-1.31□□□□□ -2.62
PRPF40A-207ENST00000471701 PTPRQQ9UMZ3 2332 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 COL6A3P12111 3177 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 F5P12259 2224 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 F2Z2F3 143 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 CDC42EP2O14613 210 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 PRM1P04553 51 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 CDKN2CP42773 168 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 NDUFA6P56556 154 aa-1.32□□□□□ -2.62
PRPF40A-207ENST00000471701 CDK13Q14004 1512 aaKnown RBP-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 C5orf58C9J3I9 102 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 H7C1C5 153 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 AIPO00170 330 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 NIPSNAP2O75323 286 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 BCL2P10415 239 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 ERVS71-1P61550 626 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 LCN6P62502 163 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 DMAC1Q96GE9 116 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 PYCARDQ9ULZ3 195 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 ADGBQ8N7X0 1667 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 CAMSAP1Q5T5Y3 1602 aa-1.33□□□□□ -2.62
PRPF40A-207ENST00000471701 AKAP6Q13023 2319 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 ANKRD31Q8N7Z5 1873 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 C9JAW5 83 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 APOA2P02652 100 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 OR4B1Q8NGF8 309 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 NEK7Q8TDX7 302 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 FKBP11Q9NYL4 201 aa-1.34□□□□□ -2.62
PRPF40A-207ENST00000471701 CHD6Q8TD26 2715 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 MAP1AP78559 2803 aaPredicted RBP-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 MCRIP1C9JLW8 97 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 KPNA4O00629 521 aaPredicted RBP-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 RTL8BQ17RB0 113 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 OR8J3Q8NGG0 315 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 DGCR14Q96DF8 476 aaKnown RBP-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 CARD19Q96LW7 228 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 MCEEQ96PE7 176 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 RTL8AQ9BWD3 113 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 BPESC1Q9GZL8 116 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 OTORQ9NRC9 128 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 SS18L2Q9UHA2 77 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 SSR3Q9UNL2 185 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 DOPEY2Q9Y3R5 2298 aa-1.35□□□□□ -2.63
PRPF40A-207ENST00000471701 VIRMAQ69YN4 1812 aaKnown RBP-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 GVQW2A0A096LPI5 108 aaPredicted RBP-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 CSN2P05814 226 aa-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 CCKP06307 115 aa-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 DNAJB13P59910 316 aa-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 ARL2BPQ9Y2Y0 163 aa-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 VWFP04275 2813 aa-1.36□□□□□ -2.63
PRPF40A-207ENST00000471701 SSC5DA1L4H1 1573 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 OR5H6Q8NGV6 325 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 PHB2Q99623 299 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 PBDC1Q9BVG4 233 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 ATG5Q9H1Y0 275 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 LYRM2Q9NU23 88 aaPredicted RBP-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 MPC1Q9Y5U8 109 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 DLC1Q96QB1 1528 aa-1.37□□□□□ -2.63
PRPF40A-207ENST00000471701 LRP1BQ9NZR2 4599 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 EDF1O60869 148 aaKnown RBP-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 EMX2Q04743 252 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 CCSMST1Q4G0I0 132 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 OR5A2Q8NGI9 324 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 BORCS8Q96FH0 119 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 C19orf12Q9NSK7 152 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 IL20Q9NYY1 176 aa-1.38□□□□□ -2.63
PRPF40A-207ENST00000471701 LAMB1P07942 1786 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 TRAPPC8Q9Y2L5 1435 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 LRP5O75197 1615 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 TMEM189A5PLL7 270 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 ATG12O94817 140 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 SAA1P0DJI8 122 aaPredicted RBP-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 PYYP10082 97 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 FABP2P12104 132 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 TPT1P13693 172 aaKnown RBP-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 PPP1R2P41236 205 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 MAXP61244 160 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 RHOHQ15669 191 aa-1.39□□□□□ -2.63
PRPF40A-207ENST00000471701 RGS21Q2M5E4 152 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms