RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TMEM229BQ8NBD8 167 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 OR51A4Q8NGJ6 313 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 SELENOSQ9BQE4 189 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 CBLN4Q9NTU7 201 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 MPC1Q9Y5U8 109 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 XIRP1Q702N8 1843 aaKnown RBP0.34□□□□□ -2.35
COPS3-206ENST00000471414 A0A1W2PPB8 328 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 PRORSD1PA6NEY8 169 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 KIR3DP1A8MWS1 328 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 GYPBP06028 91 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 SLC25A4P12235 298 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 RPS3P23396 243 aaKnown RBP eCLIP0.34□□□□□ -2.36
COPS3-206ENST00000471414 DNAJB13P59910 316 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 SNRPD3P62318 126 aaKnown RBP0.34□□□□□ -2.36
COPS3-206ENST00000471414 CSAG1Q6PB30 78 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 C3orf62Q6ZUJ4 267 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 SMIM15Q7Z3B0 74 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 NAT14Q8WUY8 206 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 PLAC4Q8WY50 150 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 CCDC115Q96NT0 180 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 C19orf12Q9NSK7 152 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 JPT1Q9UK76 154 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 DSPPQ9NZW4 1301 aa0.34□□□□□ -2.36
COPS3-206ENST00000471414 LOC285556D6RIA3 1793 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 IFITM5A6NNB3 132 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 M0QZK8 103 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 EDF1O60869 148 aaKnown RBP0.33□□□□□ -2.36
COPS3-206ENST00000471414 HBDP02042 147 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 S100GP29377 79 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 RPL22P35268 128 aaKnown RBP0.33□□□□□ -2.36
COPS3-206ENST00000471414 ETV6P41212 452 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 CAV3P56539 151 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 LSM3P62310 102 aaKnown RBP0.33□□□□□ -2.36
COPS3-206ENST00000471414 BLCAPP62952 87 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 QRFPP83859 136 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 C6orf52Q5T4I8 152 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 XAF1Q6GPH4 301 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 C10orf99Q6UWK7 81 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 OR5A2Q8NGI9 324 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 BRK1Q8WUW1 75 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 SKA2Q8WVK7 121 aaPredicted RBP0.33□□□□□ -2.36
COPS3-206ENST00000471414 MRPL35Q9NZE8 188 aaKnown RBP0.33□□□□□ -2.36
COPS3-206ENST00000471414 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
COPS3-206ENST00000471414 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 WDR97A6NE52 1622 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 TSTD3H0UI37 97 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 IGF2P01344 180 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 GTF2A1P52655 376 aaPredicted RBP0.32□□□□□ -2.36
COPS3-206ENST00000471414 TMEM35BQ8NCS4 154 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 OR8J3Q8NGG0 315 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 NDUFAF1Q9Y375 327 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 MED23Q9ULK4 1368 aa0.32□□□□□ -2.36
COPS3-206ENST00000471414 AFDNP55196 1824 aaKnown RBP0.31□□□□□ -2.36
COPS3-206ENST00000471414 NINQ8N4C6 2090 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 TMEM30CPA0ZSE6 113 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 TMEM189A5PLL7 270 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 UQCRQO14949 82 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 PRH1P02810 166 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 EVI2AP22794 236 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 KDELR1P24390 212 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 CKS2P33552 79 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 SPINK7P58062 85 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
COPS3-206ENST00000471414 ASB16-AS1Q495Z4 193 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 GLYATL3Q5SZD4 288 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 DEFB132Q7Z7B7 95 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 SMIM7Q9BQ49 75 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 MRPL36Q9P0J6 103 aaKnown RBP0.31□□□□□ -2.36
COPS3-206ENST00000471414 COMMD3Q9UBI1 195 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 ZNF462Q96JM2 2506 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 ZDBF2Q9HCK1 2354 aa0.31□□□□□ -2.36
COPS3-206ENST00000471414 OVOS2A0A0G2JMS6 1433 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 KIDINS220Q9ULH0 1771 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 NBDYA0A0U1RRE5 68 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 GNG14A0A1W2PPG7 69 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 H0YJX3 145 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 J3KT08 172 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 CDC42EP2O14613 210 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 SLC25A5P05141 298 aaKnown RBP0.3□□□□□ -2.36
COPS3-206ENST00000471414 B2MP61769 119 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 FXYD3Q14802 87 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 SPINK13Q1W4C9 94 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 OTOSQ8NHW6 89 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 LINC00208Q96KT6 92 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 FAM103A1Q9BTL3 118 aaKnown RBP0.3□□□□□ -2.36
COPS3-206ENST00000471414 GINS2Q9Y248 185 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 HSPB11Q9Y547 144 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
COPS3-206ENST00000471414 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 KDM5CP41229 1560 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 SYNE2Q8WXH0 6885 aaKnown RBP0.29□□□□□ -2.36
COPS3-206ENST00000471414 IGHV1-24A0A0C4DH33 117 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 A0A0G2JMM0 328 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 PNMA8CA0A1B0GUJ8 204 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 HIGD1CA8MV81 97 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 TPST1O60507 370 aa0.29□□□□□ -2.36
COPS3-206ENST00000471414 DPM2O94777 84 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms