RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 LGALS9BQ3B8N2 356 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 LGALS9CQ6DKI2 356 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 CYTL1Q9NRR1 136 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 IGHV1-69DA0A0B4J2H0 117 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 C15orf62A8K5M9 175 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 F8VRH5 84 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 IGHV1-69P01742 117 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 Q0VG73 95 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 TMEM14EPQ6UXP3 125 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 CCDC88CQ9P219 2028 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 PIFOQ8TCI5 191 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 TRIP11Q15643 1979 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 C9JQL5 133 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 GNRH2O43555 120 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRR20EP86478 221 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRR20CP86479 221 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRR20DP86480 221 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRR20BP86481 221 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRR20AP86496 221 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 DAND5Q8N907 189 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PRRC2BQ5JSZ5 2229 aaKnown RBP5.48□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1-6A0A0C4DH72 117 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 IGLC7A0M8Q6 106 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 V9GYY9 64 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 FAM231DQ6ZW35 169 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 SH2D6Q7Z4S9 175 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 CACNA1GO43497 2377 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 ZNF638Q14966 1978 aaKnown RBP5.48□□□□□ -1.53
BRCA1-210ENST00000471181 NDUFS7O75251 213 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1-16P04430 117 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 IGLL1P15814 213 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
BRCA1-210ENST00000471181 PTPRFP10586 1907 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 TEX49A0A1B0GTD5 131 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 NDUFA4O00483 81 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 NDUFA1O15239 70 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 SPRY2O43597 315 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 APC2O95996 2303 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 K7EQD1 137 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 LMO1P25800 156 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 WFDC10BQ8IUB3 73 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 CYYR1Q96J86 154 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 LCTP09848 1927 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 TRBV10-2A0A0K0K1G8 114 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 FAM240AA0A1B0GVK7 77 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 H0YGX0 51 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 H3BQ85 93 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 K7EMI3 77 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 ZNF883P0CG24 379 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 DIRC1Q969H9 104 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 CNTRLQ7Z7A1 2325 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 TRAV23DV6A0A075B6W5 121 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 ATP6V0E2Q8NHE4 81 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 C20orf144Q9BQM9 153 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1D-17A0A075B6S4 117 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 LECT2O14960 151 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 UNQ6494/PRO21346Q6UXR6 183 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 Q6ZWC4 215 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 TMEM14BQ9NUH8 114 aa5.47□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.53
BRCA1-210ENST00000471181 IGHV7-4-1A0A0J9YVY3 117 aa5.46□□□□□ -1.53
BRCA1-210ENST00000471181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.46□□□□□ -1.53
BRCA1-210ENST00000471181 FAM120AOSQ5T036 256 aa5.46□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 WISP3O95389 354 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-210ENST00000471181 IGHV4-30-4P0DP06 118 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 IGHV4-31P0DP07 118 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 GATA3P23771 443 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 ZC2HC1AQ96GY0 325 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 PRR25Q96S07 402 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 KLK5Q9Y337 293 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-210ENST00000471181 MDC1Q14676 2089 aaKnown RBP5.46□□□□□ -1.54
BRCA1-210ENST00000471181 YPEL3P61236 119 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-210ENST00000471181 TMEM105Q8N8V8 129 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 CLEC2BQ92478 149 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 H3BRN7 92 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 C20orf78Q9BR46 151 aa5.46□□□□□ -1.54
BRCA1-210ENST00000471181 HEATR5BQ9P2D3 2071 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 ATP5G1P05496 136 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 DEFB136Q30KP8 78 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 SPART-AS1P0CW21 52 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 CRYGSP22914 178 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 FOXI1Q12951 378 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 LINC00114Q6XXX2 140 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 FOXI2Q6ZQN5 318 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 PYGO2Q9BRQ0 406 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 SCN4AP35499 1836 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 KIR2DL5BA0A0G2JN68 375 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 KIR2DL5BA0A0G2JPC4 375 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 C5orf63A6NC05 138 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 RBAKDNA6NC62 111 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 A6NED7 52 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 SRSF2Q01130 221 aaKnown RBP5.45□□□□□ -1.54
BRCA1-210ENST00000471181 C9orf66Q5T8R8 295 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 KIR2DL5AQ8N109 375 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 ZNF491Q8N8L2 437 aa5.45□□□□□ -1.54
BRCA1-210ENST00000471181 C16orf74Q96GX8 76 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms