RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 V9GYV3 84 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
COL4A5-203ENST00000470339 GATCO43716 136 aaKnown RBP11.23□□□□□ -0.61
COL4A5-203ENST00000470339 P01737 135 aa11.23□□□□□ -0.61
COL4A5-203ENST00000470339 CRIP1P50238 77 aa11.23□□□□□ -0.61
COL4A5-203ENST00000470339 ODF3L2Q3SX64 289 aa11.23□□□□□ -0.61
COL4A5-203ENST00000470339 CT83Q5H943 113 aa11.23□□□□□ -0.61
COL4A5-203ENST00000470339 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-203ENST00000470339 H3BMM0 161 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 TSPOP30536 169 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 LEPP41159 167 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 ZFAND2AQ8N6M9 145 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
COL4A5-203ENST00000470339 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-203ENST00000470339 KLLNB2CW77 178 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 SH2D1AO60880 128 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
COL4A5-203ENST00000470339 S100PP25815 95 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-203ENST00000470339 ACTL10Q5JWF8 245 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 MDFIQ99750 246 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
COL4A5-203ENST00000470339 IL36BQ9NZH7 164 aa11.21□□□□□ -0.61
COL4A5-203ENST00000470339 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 A8MWL6 223 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 GPX1P07203 203 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 C19orf73Q9NVV2 129 aa11.2□□□□□ -0.62
COL4A5-203ENST00000470339 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 SMIM27A0A1W2PRY6 76 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 IGLL1P15814 213 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 CDKN1BP46527 198 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 RPS20P60866 119 aaKnown RBP11.19□□□□□ -0.62
COL4A5-203ENST00000470339 Q6AWC8 147 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 TSKUQ8WUA8 353 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 YPEL4Q96NS1 127 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
COL4A5-203ENST00000470339 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
COL4A5-203ENST00000470339 XKRY2A2RUG3 117 aa11.18□□□□□ -0.62
COL4A5-203ENST00000470339 CD7P09564 240 aa11.18□□□□□ -0.62
COL4A5-203ENST00000470339 ELOBQ15370 118 aa11.18□□□□□ -0.62
COL4A5-203ENST00000470339 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
COL4A5-203ENST00000470339 ZMAT5Q9UDW3 170 aaKnown RBP11.18□□□□□ -0.62
COL4A5-203ENST00000470339 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 AMBPP02760 352 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
COL4A5-203ENST00000470339 ZNF124Q15973 351 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
COL4A5-203ENST00000470339 STHQ8IWL8 128 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 OR2D3Q8NGH3 330 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 PYGO2Q9BRQ0 406 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 ANK2Q01484 3957 aa11.17□□□□□ -0.62
COL4A5-203ENST00000470339 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 C7orf71A4D174 169 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 COLCA2A8K830 154 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 FOXA3P55318 350 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-203ENST00000470339 PRR9Q5T870 116 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
COL4A5-203ENST00000470339 TRRAPQ9Y4A5 3859 aa11.15□□□□□ -0.62
COL4A5-203ENST00000470339 ORM1P02763 201 aa11.15□□□□□ -0.62
COL4A5-203ENST00000470339 CXCL1P09341 107 aa11.15□□□□□ -0.62
COL4A5-203ENST00000470339 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
COL4A5-203ENST00000470339 RPL19P84098 196 aaKnown RBP11.15□□□□□ -0.62
COL4A5-203ENST00000470339 NAT8BQ9UHF3 227 aa11.15□□□□□ -0.62
COL4A5-203ENST00000470339 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 CA1P00915 261 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-203ENST00000470339 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
COL4A5-203ENST00000470339 GFI1BQ5VTD9 330 aa11.14□□□□□ -0.63
COL4A5-203ENST00000470339 C20orf144Q9BQM9 153 aa11.14□□□□□ -0.63
COL4A5-203ENST00000470339 PKD1L1Q8TDX9 2849 aa11.14□□□□□ -0.63
COL4A5-203ENST00000470339 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 M0R2Z0 102 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 NEU1Q99519 415 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
COL4A5-203ENST00000470339 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 J3KRW8 73 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-203ENST00000470339 TYMSP04818 313 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 TDRG1Q3Y452 100 aa11.12□□□□□ -0.63
COL4A5-203ENST00000470339 MORN3Q6PF18 240 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-203ENST00000470339 Q8N1Y9 231 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms