RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CHAC2Q8WUX2 184 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 MRPL32Q9BYC8 188 aaKnown RBP8.3□□□□□ -1.08
HDAC3-204ENST00000469207 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 PVALBP20472 110 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-204ENST00000469207 PDE6HQ13956 83 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 PHYHIPLQ96FC7 376 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 ARPC5LQ9BPX5 153 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 OR51M1Q9H341 326 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 AAMDCQ9H7C9 122 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 GPN1Q9HCN4 374 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-204ENST00000469207 NUDT15Q9NV35 164 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 PTTG2Q9NZH5 202 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 LY96Q9Y6Y9 160 aa8.29□□□□□ -1.08
HDAC3-204ENST00000469207 LOC100131303A0A0U1RQF7 123 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 EIF3GO75821 320 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC3-204ENST00000469207 SIX6O95475 246 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 IFNA5P01569 189 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 NMBP08949 121 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 GYPEP15421 78 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 ZNF138P52744 262 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 CNPY1Q3B7I2 92 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
HDAC3-204ENST00000469207 H2AFB2P0C5Z0 115 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 RANP62826 216 aaKnown RBP8.27□□□□□ -1.09
HDAC3-204ENST00000469207 HBG1P69891 147 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 HBG2P69892 147 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 SLAQ13239 276 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 CDPF1Q6NVV7 123 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 STX12Q86Y82 276 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 OR5C1Q8NGR4 320 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 FRZBQ92765 325 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 PAXXQ9BUH6 204 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.09
HDAC3-204ENST00000469207 TRAV9-2A0A087WT02 112 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 GNRH2O43555 120 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 GCSHP23434 173 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 SRIP30626 198 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 ZNF415Q09FC8 603 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 TMEM183BQ1AE95 376 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 TMEM183AQ8IXX5 376 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 OR5AC2Q9NZP5 309 aa8.26□□□□□ -1.09
HDAC3-204ENST00000469207 FLG2Q5D862 2391 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-204ENST00000469207 IGHV3-16A0A0C4DH30 117 aa8.25□□□□□ -1.09
HDAC3-204ENST00000469207 H0YIZ8 118 aa8.25□□□□□ -1.09
HDAC3-204ENST00000469207 IQCF2Q8IXL9 164 aa8.25□□□□□ -1.09
HDAC3-204ENST00000469207 RASL10AQ92737 203 aa8.25□□□□□ -1.09
HDAC3-204ENST00000469207 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
HDAC3-204ENST00000469207 CRYGDP07320 174 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 EVI2AP22794 236 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 ZNF266Q14584 549 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 LRRC37A5PQ49AS3 106 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 OR10G4Q8NGN3 311 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 HYLS1Q96M11 299 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 NAGKQ9UJ70 344 aa8.24□□□□□ -1.09
HDAC3-204ENST00000469207 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
HDAC3-204ENST00000469207 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-204ENST00000469207 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
HDAC3-204ENST00000469207 OR7C2O60412 319 aa8.23□□□□□ -1.09
HDAC3-204ENST00000469207 Q6AWC8 147 aa8.23□□□□□ -1.09
HDAC3-204ENST00000469207 FAM159AQ6UWV7 190 aa8.23□□□□□ -1.09
HDAC3-204ENST00000469207 PCNPQ8WW12 178 aaKnown RBP8.23□□□□□ -1.09
HDAC3-204ENST00000469207 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
HDAC3-204ENST00000469207 FAM240BA0A1B0GVZ2 78 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 DIRC3C9JPN6 131 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 CSN1S1P47710 185 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 SPXQ9BT56 116 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 RPH3ALQ9UNE2 315 aa8.22□□□□□ -1.09
HDAC3-204ENST00000469207 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 TRBV7-9A0A0J9YWB2 115 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 ORM1P02763 201 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 TVP23CQ96ET8 276 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 SGK494Q96LW2 274 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 TXNDC17Q9BRA2 123 aa8.21□□□□□ -1.1
HDAC3-204ENST00000469207 TRGV11A0A075B6L2 103 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 TRAV8-1A0A0A6YYK1 113 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-38A0A0C4DH36 116 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 PGPA6NDG6 321 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 C9JCJ5 164 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 F6UZH7 168 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 FAM229AH3BQW9 127 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 PSCAO43653 123 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 TYMSP04818 313 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 UBE2L3P68036 154 aaKnown RBP8.2□□□□□ -1.1
HDAC3-204ENST00000469207 FFAR4Q5NUL3 377 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 NHLRC2Q8NBF2 726 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 Q9HAA7 133 aa8.2□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-73A0A0B4J1V6 119 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 M0R2P5 195 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
HDAC3-204ENST00000469207 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms