RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 H7BYZ3 331 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 M0R2Z0 102 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 M0R3E3 92 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 CRISP2P16562 243 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 PPT1P50897 306 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 MAP1LC3BQ9GZQ8 125 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 IGHV4-28A0A0C4DH34 117 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 A0A1B0GV90 55 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 KLLNB2CW77 178 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 PRAC2D3DTV9 90 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 CRXO43186 299 aaPredicted RBP6.19□□□□□ -1.42
SSBP1-208ENST00000469123 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.427e-6■□□□□ 9.1
SSBP1-208ENST00000469123 CT45A10P0DMU9 189 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 ZNF138P52744 262 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 FXYD7P58549 80 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 ZNF493Q6ZR52 646 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 C11orf45Q8TAV5 145 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 C14orf144Q96I85 54 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 PYGO2Q9BRQ0 406 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 NIPSNAP3BQ9BS92 247 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 ZNF492Q9P255 531 aa6.19□□□□□ -1.42
SSBP1-208ENST00000469123 IGHV3OR16-12A0A075B7B8 117 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 C7orf71A4D174 169 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 F6UZH7 168 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 HMGB3O15347 200 aaKnown RBP6.18□□□□□ -1.42
SSBP1-208ENST00000469123 SCO1O75880 301 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 SPART-AS1P0CW21 52 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 ODF1Q14990 250 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 ZNF726P1Q15940 193 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 COMMD7Q86VX2 200 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 FAM213BQ8TBF2 198 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 MBD3L1Q8WWY6 194 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 FAM210BQ96KR6 192 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 LINC01587Q99440 93 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 LINC00467Q9BRT7 94 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 NDFIP1Q9BT67 221 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
SSBP1-208ENST00000469123 KLK5Q9Y337 293 aaPredicted RBP6.18□□□□□ -1.42
SSBP1-208ENST00000469123 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 IGKV2-40A0A087WW87 121 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 TRAV1-1A0A0B4J248 108 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 LOC102723971A0A1B0GUV8 181 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 IGKV2D-40P01614 121 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 PPBPP02775 128 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 GPX1P07203 203 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 RBMY1A1P0DJD3 496 aaKnown RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 RBMY1CP0DJD4 496 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 SULT1A2P50226 295 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 RBMY1FQ15415 496 aaKnown RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 CASC10Q5T4H9 136 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 GOLT1AQ6ZVE7 132 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 C9orf62Q8N4C0 152 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 CYB561D1Q8N8Q1 229 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 TMEM75Q8N9X5 138 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 VGLL1Q99990 258 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 ATG101Q9BSB4 218 aa6.17□□□□□ -1.42
SSBP1-208ENST00000469123 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
SSBP1-208ENST00000469123 FAM74A7A6NL05 159 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 TCRAP04437 139 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 G0S2P27469 103 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 TAGLN2P37802 199 aaKnown RBP6.16□□□□□ -1.42
SSBP1-208ENST00000469123 TCTAP57738 103 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 PKIAP61925 76 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
SSBP1-208ENST00000469123 ERCC8Q13216 396 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 SSX7Q7RTT5 188 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 EPDR1Q9UM22 224 aa6.16□□□□□ -1.42
SSBP1-208ENST00000469123 K7EP13 123 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 DLEU1O43261 78 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 FGF8P55075 233 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-208ENST00000469123 RAB5BP61020 215 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 RBX1P62877 108 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 Q6AWC8 147 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-208ENST00000469123 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
SSBP1-208ENST00000469123 DKK2Q9UBU2 259 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 RPH3ALQ9UNE2 315 aa6.15□□□□□ -1.42
SSBP1-208ENST00000469123 TIMM8BQ9Y5J9 83 aaPredicted RBP6.15□□□□□ -1.42
SSBP1-208ENST00000469123 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.43
SSBP1-208ENST00000469123 TRAV10A0A0B4J240 114 aa6.14□□□□□ -1.43
SSBP1-208ENST00000469123 TRAV12-3A0A0B4J271 114 aa6.14□□□□□ -1.43
SSBP1-208ENST00000469123 TRAV21A0A0B4J279 112 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms