RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TAS2R45P59539 299 aa15.09■□□□□ 0.01
TTC28-204ENST00000468807 KHDC3LQ587J8 217 aa15.09■□□□□ 0.01
TTC28-204ENST00000468807 MRPL16Q9NX20 251 aaKnown RBP15.09■□□□□ 0.01
TTC28-204ENST00000468807 MUC4Q99102 2169 aa15.08■□□□□ 0.01
TTC28-204ENST00000468807 TTC32Q5I0X7 151 aa15.08■□□□□ 0
TTC28-204ENST00000468807 IBA57Q5T440 356 aaKnown RBP15.08■□□□□ 0
TTC28-204ENST00000468807 VSIG2Q96IQ7 327 aa15.08■□□□□ 0
TTC28-204ENST00000468807 HYLS1Q96M11 299 aa15.08■□□□□ 0
TTC28-204ENST00000468807 MUC21Q5SSG8 566 aa15.07■□□□□ 0
TTC28-204ENST00000468807 LYPD1Q8N2G4 141 aa15.07■□□□□ 0
TTC28-204ENST00000468807 C18orf15Q96N68 181 aa15.07■□□□□ 0
TTC28-204ENST00000468807 RPH3ALQ9UNE2 315 aa15.07■□□□□ 0
TTC28-204ENST00000468807 MRPS16Q9Y3D3 137 aaKnown RBP15.07■□□□□ 0
TTC28-204ENST00000468807 A0A096LPF7 62 aa15.06■□□□□ 0
TTC28-204ENST00000468807 C16orf90A8MZG2 172 aa15.06■□□□□ 0
TTC28-204ENST00000468807 ZNF415Q09FC8 603 aa15.06■□□□□ 0
TTC28-204ENST00000468807 UPK3BQ9BT76 320 aa15.06■□□□□ 0
TTC28-204ENST00000468807 KRTAP1-5Q9BYS1 174 aa15.06■□□□□ 0
TTC28-204ENST00000468807 ABCA13Q86UQ4 5058 aa15.06■□□□□ 0
TTC28-204ENST00000468807 LRP1BQ9NZR2 4599 aa15.05■□□□□ 0
TTC28-204ENST00000468807 RBAKDNA6NC62 111 aa15.05■□□□□ -0
TTC28-204ENST00000468807 ST6GAL2Q96JF0 529 aa15.05■□□□□ -0
TTC28-204ENST00000468807 TRBV7-9A0A0J9YWB2 115 aa15.04■□□□□ -0
TTC28-204ENST00000468807 DIRC3C9JPN6 131 aa15.04■□□□□ -0
TTC28-204ENST00000468807 PAX4O43316 350 aa15.04■□□□□ -0
TTC28-204ENST00000468807 CMTM2Q8TAZ6 248 aa15.04■□□□□ -0
TTC28-204ENST00000468807 WFDC1Q9HC57 220 aa15.04■□□□□ -0
TTC28-204ENST00000468807 A0A1W2PPV4 95 aa15.03■□□□□ -0
TTC28-204ENST00000468807 ZNF266Q14584 549 aa15.03■□□□□ -0
TTC28-204ENST00000468807 ACOT6Q3I5F7 207 aaPredicted RBP15.03■□□□□ -0
TTC28-204ENST00000468807 NAGKQ9UJ70 344 aa15.03■□□□□ -0
TTC28-204ENST00000468807 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
TTC28-204ENST00000468807 HSPG2P98160 4391 aa15.02■□□□□ -0
TTC28-204ENST00000468807 PGPA6NDG6 321 aa15.02■□□□□ -0
TTC28-204ENST00000468807 FAM74A1Q5RGS3 127 aa15.02■□□□□ -0
TTC28-204ENST00000468807 MDFICQ9P1T7 246 aa15.02■□□□□ -0
TTC28-204ENST00000468807 HMGB3O15347 200 aaKnown RBP15.01□□□□□ -0.01
TTC28-204ENST00000468807 RAB2AP61019 212 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 TMEM183BQ1AE95 376 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 FAM159AQ6UWV7 190 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 TMEM183AQ8IXX5 376 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 C8orf49Q96NF6 230 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 OTORQ9NRC9 128 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 PRO0255Q9UI72 69 aa15.01□□□□□ -0.01
TTC28-204ENST00000468807 A0A1W2PPQ1 181 aa15□□□□□ -0.01
TTC28-204ENST00000468807 HHLA3Q9XRX5 114 aa15□□□□□ -0.01
TTC28-204ENST00000468807 ALG5Q9Y673 324 aa15□□□□□ -0.01
TTC28-204ENST00000468807 TRGV4A0A0C4DH28 118 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 Q6AWC8 147 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 PQLC2Q6ZP29 291 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 GOLT1AQ6ZVE7 132 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 OR10G4Q8NGN3 311 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 OR10G9Q8NGN4 311 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 OR10G7Q8NGN6 311 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 LENEPQ9Y5L5 61 aa14.99□□□□□ -0.01
TTC28-204ENST00000468807 TRGV11A0A075B6L2 103 aa14.98□□□□□ -0.01
TTC28-204ENST00000468807 CRYBA4P53673 196 aa14.98□□□□□ -0.01
TTC28-204ENST00000468807 SLAQ13239 276 aa14.98□□□□□ -0.01
TTC28-204ENST00000468807 SPATA12Q7Z6I5 190 aa14.98□□□□□ -0.01
TTC28-204ENST00000468807 SIVA1O15304 175 aa14.97□□□□□ -0.01
TTC28-204ENST00000468807 SFTA3P0C7M3 94 aa14.97□□□□□ -0.01
TTC28-204ENST00000468807 FHL2Q14192 279 aa14.97□□□□□ -0.01
TTC28-204ENST00000468807 F6UZH7 168 aa14.96□□□□□ -0.01
TTC28-204ENST00000468807 NXPH4O95158 308 aa14.96□□□□□ -0.01
TTC28-204ENST00000468807 GNG5P63218 68 aa14.96□□□□□ -0.01
TTC28-204ENST00000468807 HSD17B11Q8NBQ5 300 aa14.96□□□□□ -0.01
TTC28-204ENST00000468807 TMED6Q8WW62 240 aa14.96□□□□□ -0.01
TTC28-204ENST00000468807 DNAH5Q8TE73 4624 aa14.96□□□□□ -0.02
TTC28-204ENST00000468807 TRAV8-1A0A0A6YYK1 113 aa14.95□□□□□ -0.02
TTC28-204ENST00000468807 LINC00315P59091 139 aa14.95□□□□□ -0.02
TTC28-204ENST00000468807 MRPL23Q16540 153 aaKnown RBP14.95□□□□□ -0.02
TTC28-204ENST00000468807 BATF3Q9NR55 127 aa14.95□□□□□ -0.02
TTC28-204ENST00000468807 ARL14EPLP0DKL9 152 aa14.94□□□□□ -0.02
TTC28-204ENST00000468807 CDC34P49427 236 aaPredicted RBP14.94□□□□□ -0.02
TTC28-204ENST00000468807 PCNPQ8WW12 178 aaKnown RBP14.94□□□□□ -0.02
TTC28-204ENST00000468807 ZNF479Q96JC4 524 aa14.94□□□□□ -0.02
TTC28-204ENST00000468807 SPXQ9BT56 116 aa14.94□□□□□ -0.02
TTC28-204ENST00000468807 MED28Q9H204 178 aa14.94□□□□□ -0.02
TTC28-204ENST00000468807 TREM1Q9NP99 234 aa14.94□□□□□ -0.02
TTC28-204ENST00000468807 APOBP04114 4563 aaKnown RBP14.93□□□□□ -0.02
TTC28-204ENST00000468807 TRAV21A0A0B4J279 112 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 GNRH2O43555 120 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 LYPD5Q6UWN5 251 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 NEGR1Q7Z3B1 354 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 RASL10AQ92737 203 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 SGK494Q96LW2 274 aa14.93□□□□□ -0.02
TTC28-204ENST00000468807 SRIP30626 198 aa14.92□□□□□ -0.02
TTC28-204ENST00000468807 PTTG1O95997 202 aa14.91□□□□□ -0.02
TTC28-204ENST00000468807 BTF3P20290 206 aaKnown RBP14.91□□□□□ -0.02
TTC28-204ENST00000468807 TDRG1Q3Y452 100 aa14.91□□□□□ -0.02
TTC28-204ENST00000468807 TVP23CQ96ET8 276 aa14.91□□□□□ -0.02
TTC28-204ENST00000468807 NDFIP1Q9BT67 221 aa14.91□□□□□ -0.02
TTC28-204ENST00000468807 SDF2L1Q9HCN8 221 aa14.91□□□□□ -0.02
TTC28-204ENST00000468807 K7EQD1 137 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 STAG3L2P0CL84 134 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 STAG3L3P0CL85 134 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 GYPEP15421 78 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 ARL6IP6Q8N6S5 226 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 OR4C5Q8NGB2 326 aa14.9□□□□□ -0.02
TTC28-204ENST00000468807 OR2G3Q8NGZ4 309 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms