RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ERCC8Q13216 396 aa11.35□□□□□ -0.59
PRPF38B-204ENST00000467302 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
PRPF38B-204ENST00000467302 IGHV4-30-2A0A087WSY4 118 aa11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 BUB3O43684 328 aa11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 FAM110DQ8TAY7 271 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 ABCA2Q9BZC7 2435 aa11.34□□□□□ -0.59
PRPF38B-204ENST00000467302 A1L4Q6 167 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 HSD52Q0P140 79 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 OCIAD2Q56VL3 154 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 CLPSL1A2RUU4 121 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 H3BRM9 83 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 RAB9AP51151 201 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
PRPF38B-204ENST00000467302 ZFYVE26Q68DK2 2539 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 IGHV1-69DA0A0B4J2H0 117 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 A6NDN8 102 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 IGHV1-69P01742 117 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 ZMAT4Q9H898 229 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 ZNF462Q96JM2 2506 aa11.32□□□□□ -0.6
PRPF38B-204ENST00000467302 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 CLEC3BP05452 202 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 FCER1GP30273 86 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 TCTAP57738 103 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 WFDC3Q8IUB2 231 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
PRPF38B-204ENST00000467302 MSMBP08118 114 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 LEPP41159 167 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 ODF1Q14990 250 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 C11orf21Q9P2W6 132 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 IGLV2-18A0A075B6J9 118 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 PPIFP30405 207 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 NMUP48645 174 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 JMJD8Q96S16 334 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
PRPF38B-204ENST00000467302 UBR5O95071 2799 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 SLC25A16P16260 332 aa11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 EVI2AP22794 236 aa11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 NRGNQ92686 78 aa11.29□□□□□ -0.6
PRPF38B-204ENST00000467302 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
PRPF38B-204ENST00000467302 BRD3OSQ6XYD6 125 aa11.28□□□□□ -0.6
PRPF38B-204ENST00000467302 IGHV3-66A0A0C4DH42 116 aa11.28□□□□□ -0.6
PRPF38B-204ENST00000467302 Q8N8P6 123 aa11.28□□□□□ -0.6
PRPF38B-204ENST00000467302 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
PRPF38B-204ENST00000467302 IGKV2D-26A0A0A0MRZ7 120 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 B4DSR2 109 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 MEGF9Q9H1U4 602 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
PRPF38B-204ENST00000467302 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 H3BUT2 72 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 TRGV3P03979 118 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 GATA3P23771 443 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 U3KQE9 123 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 G3V318 75 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 K7EP34 96 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 IGHV4-38-2P0DP08 117 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 TMEM219Q86XT9 240 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 NRACQ8N912 160 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 OR2K2Q8NGT1 345 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
PRPF38B-204ENST00000467302 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
PRPF38B-204ENST00000467302 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
PRPF38B-204ENST00000467302 C9orf47Q6ZRZ4 202 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms