RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 K7EM74 188 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 K7EMT4 169 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 SSSCA1O60232 199 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 IGKCP01834 107 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 CD7P09564 240 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 COX6A1P12074 109 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 HLA-DRB4P13762 266 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 CTLA4P16410 223 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 SMIM11AP58511 58 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 FKBP1AP62942 108 aaKnown RBP2.33□□□□□ -2.04
VPS13D-203ENST00000466732 INSL4Q14641 139 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 Q6ZQT7 251 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF493Q6ZR52 646 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 DRAM1Q8N682 238 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF645Q8N7E2 425 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 FAM57AQ8TBR7 257 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF721Q8TF20 911 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 FGF13Q92913 245 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 AICDAQ9GZX7 198 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 C16orf95Q9H693 158 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 F11RQ9Y624 299 aaKnown RBP2.33□□□□□ -2.04
VPS13D-203ENST00000466732 HLA-DRB4X5D2U9 266 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 NUP98P52948 1817 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 UBR3Q6ZT12 1888 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 MYO16Q9Y6X6 1858 aa2.33□□□□□ -2.04
VPS13D-203ENST00000466732 LCTP09848 1927 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 TRBV6-6A0A0A6YYG2 114 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 TRGV5A0A0B4J1U4 118 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 IGKV6-21A0A0C4DH24 114 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 MDFIC2A0A1B0GVS7 189 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 LYRM9A8MSI8 78 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 F2Z2F3 143 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 SMKR1H3BMG3 65 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 H3BT86 120 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 ATOX1O00244 68 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 MRPS12O15235 138 aaKnown RBP2.32□□□□□ -2.04
VPS13D-203ENST00000466732 PDCD6O75340 191 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 NDUFB2O95178 105 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 WISP3O95389 354 aaPredicted RBP2.32□□□□□ -2.04
VPS13D-203ENST00000466732 TCL1BO95988 128 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 GYPBP06028 91 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 SCGB1C2P0DMR2 95 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 CCL1P22362 96 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 COL8A2P25067 703 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 DSCR4P56555 118 aaPredicted RBP2.32□□□□□ -2.04
VPS13D-203ENST00000466732 NPC2P61916 151 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 QRFPP83859 136 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 ZNF117Q03924 483 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 LGALS9BQ3B8N2 356 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 PCP2Q8IVA1 136 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 OR5AS1Q8N127 324 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 WFDC11Q8NEX6 87 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 H1FXQ92522 213 aaKnown RBP2.32□□□□□ -2.04
VPS13D-203ENST00000466732 LINC01600Q96MT4 127 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 GPX7Q96SL4 187 aaPredicted RBP2.32□□□□□ -2.04
VPS13D-203ENST00000466732 DSCR8Q96T75 97 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 IL36BQ9NZH7 164 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 GNG13Q9P2W3 67 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 V9GY05 133 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 DYSFO75923 2080 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 MYO9BQ13459 2157 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 MYO7AQ13402 2215 aa2.32□□□□□ -2.04
VPS13D-203ENST00000466732 EML5Q05BV3 1969 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 TRAV8-2A0A0B4J237 113 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 IGHV1-24A0A0C4DH33 117 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 hADV29S1A0JD25 119 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 CEBPZOSA8MTT3 80 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 J3QRE1 110 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 CCL21O00585 134 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 CST7O76096 145 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 SLC25A14O95258 325 aaPredicted RBP2.31□□□□□ -2.04
VPS13D-203ENST00000466732 TCRAP04437 139 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 IGHV4-34P06331 123 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 S100A3P33764 101 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 CXCL5P42830 114 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 SSR2P43308 183 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 RPS11P62280 158 aaKnown RBP eCLIP2.31□□□□□ -2.04
VPS13D-203ENST00000466732 HBG1P69891 147 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 HBG2P69892 147 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 MRPS36P82909 103 aaKnown RBP2.31□□□□□ -2.04
VPS13D-203ENST00000466732 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 DGAT2L6Q6ZPD8 337 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 LINC00305Q7Z4B0 112 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 SLC22A24Q8N4F4 322 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 LY6G5BQ8NDX9 201 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 NT5CQ8TCD5 201 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 NMNAT3Q96T66 252 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 MGST2Q99735 147 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 PRSS27Q9BQR3 290 aa2.31□□□□□ -2.04
VPS13D-203ENST00000466732 HDHD3Q9BSH5 251 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms