RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SPINK4O60575 86 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 SLAQ13239 276 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 FAM159AQ6UWV7 190 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
COL7A1-206ENST00000466591 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 PTTG2Q9NZH5 202 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 TP53TG3Q9ULZ0 132 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 A0A096LPF7 62 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 MPC2O95563 127 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 RPL12P30050 165 aaKnown RBP12.13□□□□□ -0.47
COL7A1-206ENST00000466591 PRR9Q5T870 116 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
COL7A1-206ENST00000466591 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 SIVA1O15304 175 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 H2BFSP57053 126 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 ACOT6Q3I5F7 207 aaPredicted RBP12.12□□□□□ -0.47
COL7A1-206ENST00000466591 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 VSIG2Q96IQ7 327 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
COL7A1-206ENST00000466591 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 TRGV11A0A075B6L2 103 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 EREGO14944 169 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 MARVELD1Q9BSK0 173 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
COL7A1-206ENST00000466591 ZNF266Q14584 549 aa12.1□□□□□ -0.47
COL7A1-206ENST00000466591 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
COL7A1-206ENST00000466591 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
COL7A1-206ENST00000466591 TMEM183AQ8IXX5 376 aa12.1□□□□□ -0.47
COL7A1-206ENST00000466591 DNAH11Q96DT5 4516 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 TRAV9-2A0A087WT02 112 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 PGPA6NDG6 321 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 DIRC3C9JPN6 131 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 NXPH4O95158 308 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
COL7A1-206ENST00000466591 SRIP30626 198 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 OTORQ9NRC9 128 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 PKD1P98161 4303 aa12.09□□□□□ -0.47
COL7A1-206ENST00000466591 IFITM3Q01628 133 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 Q6ZQT7 251 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 MAPKAPK5-AS1Q8N8E1 139 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 SPXQ9BT56 116 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 NDFIP1Q9BT67 221 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 KRTAP1-5Q9BYS1 174 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
COL7A1-206ENST00000466591 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL7A1-206ENST00000466591 CRYBA4P53673 196 aa12.07□□□□□ -0.48
COL7A1-206ENST00000466591 LINC00315P59091 139 aa12.07□□□□□ -0.48
COL7A1-206ENST00000466591 PQLC2Q6ZP29 291 aa12.07□□□□□ -0.48
COL7A1-206ENST00000466591 GOLT1AQ6ZVE7 132 aa12.07□□□□□ -0.48
COL7A1-206ENST00000466591 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
COL7A1-206ENST00000466591 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
COL7A1-206ENST00000466591 HMGB3O15347 200 aaKnown RBP12.06□□□□□ -0.48
COL7A1-206ENST00000466591 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
COL7A1-206ENST00000466591 OR10G4Q8NGN3 311 aa12.06□□□□□ -0.48
COL7A1-206ENST00000466591 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
COL7A1-206ENST00000466591 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
COL7A1-206ENST00000466591 MDFICQ9P1T7 246 aa12.06□□□□□ -0.48
COL7A1-206ENST00000466591 TRAV21A0A0B4J279 112 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 A6NHS1 94 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 K7EQM0 130 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 ORM1P02763 201 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 Q6AWC8 147 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 TMED6Q8WW62 240 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 TREM1Q9NP99 234 aa12.05□□□□□ -0.48
COL7A1-206ENST00000466591 C9JCJ5 164 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 F6UZH7 168 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 GYPEP15421 78 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 RAB2AP61019 212 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 FHL2Q14192 279 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 LY96Q9Y6Y9 160 aa12.04□□□□□ -0.48
COL7A1-206ENST00000466591 EVI2AP22794 236 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
COL7A1-206ENST00000466591 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 IQCF2Q8IXL9 164 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
COL7A1-206ENST00000466591 M0R2P5 195 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 ZFP69Q49AA0 526 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 WFDC1Q9HC57 220 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 PCLOQ9Y6V0 5065 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 MUC4Q99102 2169 aa12.02□□□□□ -0.49
COL7A1-206ENST00000466591 TRAV4A0A0B4J268 109 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 K7EQD1 137 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 PPT1P50897 306 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 GNG5P63218 68 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 ASB13Q8WXK3 278 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms