RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 OR11H2Q8NH07 326 aa15.25■□□□□ 0.03
SDF4-205ENST00000465727 SVIPQ8NHG7 77 aa15.25■□□□□ 0.03
SDF4-205ENST00000465727 IGHV4-4A0A075B6R2 117 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 E7EQL1 145 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 PRRG2O14669 202 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 CTSGP08311 255 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 CKS1BP61024 79 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 IGFL4Q6B9Z1 124 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 OR11H6Q8NGC7 330 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 MRAP2Q96G30 205 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 SLC50A1Q9BRV3 221 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 ZZEF1O43149 2961 aa15.24■□□□□ 0.03
SDF4-205ENST00000465727 IGKV3D-20A0A0C4DH25 116 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 APOMO95445 188 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 IGF2-ASQ6U949 168 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 TMEM238LA0A1B0GVL6 79 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 A6NJY4 79 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 HOXA3O43365 443 aaPredicted RBP15.23■□□□□ 0.03
SDF4-205ENST00000465727 TRGV3P03979 118 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 SLC25A16P16260 332 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 PPIFP30405 207 aaKnown RBP15.23■□□□□ 0.03
SDF4-205ENST00000465727 ERCC8Q13216 396 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 MTURNQ8N3F0 131 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 C1QTNF4Q9BXJ3 329 aa15.23■□□□□ 0.03
SDF4-205ENST00000465727 PKDREJQ9NTG1 2253 aa15.22■□□□□ 0.03
SDF4-205ENST00000465727 B9A039 149 aa15.22■□□□□ 0.03
SDF4-205ENST00000465727 PIP4P1Q86T03 277 aa15.22■□□□□ 0.03
SDF4-205ENST00000465727 ONECUT1Q9UBC0 465 aa15.22■□□□□ 0.03
SDF4-205ENST00000465727 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 LCNL1Q6ZST4 164 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 LY6G5BQ8NDX9 201 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 RP1L1Q8IWN7 2480 aaPredicted RBP15.21■□□□□ 0.03
SDF4-205ENST00000465727 IGHV7-4-1A0A0J9YVY3 117 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 FOXI1Q12951 378 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 ORMDL2Q53FV1 153 aa15.21■□□□□ 0.03
SDF4-205ENST00000465727 MORN3Q6PF18 240 aaPredicted RBP15.21■□□□□ 0.03
SDF4-205ENST00000465727 MRPL16Q9NX20 251 aaKnown RBP15.21■□□□□ 0.03
SDF4-205ENST00000465727 CFAP126Q5VTH2 177 aa15.2■□□□□ 0.02
SDF4-205ENST00000465727 DLX4Q92988 240 aaPredicted RBP15.2■□□□□ 0.02
SDF4-205ENST00000465727 PRAC2D3DTV9 90 aa15.2■□□□□ 0.02
SDF4-205ENST00000465727 KLRD1Q13241 179 aa15.2■□□□□ 0.02
SDF4-205ENST00000465727 HES1Q14469 280 aa15.2■□□□□ 0.02
SDF4-205ENST00000465727 SMIM2Q9BVW6 85 aa15.2■□□□□ 0.02
SDF4-205ENST00000465727 CACNA1AO00555 2505 aa15.19■□□□□ 0.02
SDF4-205ENST00000465727 INSL3P51460 131 aa15.19■□□□□ 0.02
SDF4-205ENST00000465727 EFNA4P52798 201 aa15.19■□□□□ 0.02
SDF4-205ENST00000465727 MRPL53Q96EL3 112 aaKnown RBP15.19■□□□□ 0.02
SDF4-205ENST00000465727 HIF1ANQ9NWT6 349 aa15.19■□□□□ 0.02
SDF4-205ENST00000465727 UFC1Q9Y3C8 167 aa15.19■□□□□ 0.02
SDF4-205ENST00000465727 IGHV3-23P01764 117 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 SCGB2A2Q13296 93 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 C11orf21Q9P2W6 132 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 SMG1Q96Q15 3661 aaKnown RBP15.18■□□□□ 0.02
SDF4-205ENST00000465727 BUB3O43684 328 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 NDPQ00604 133 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 LYRM7Q5U5X0 104 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 TOMM6Q96B49 74 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 PGPEP1Q9NXJ5 209 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 CYSLTR1Q9Y271 337 aa15.18■□□□□ 0.02
SDF4-205ENST00000465727 TRAV26-2A0A0B4J265 109 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 LGALS1P09382 135 aaKnown RBP15.17■□□□□ 0.02
SDF4-205ENST00000465727 ATP5G2Q06055 141 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 TMEM78Q5T7P6 136 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 SPANXN1Q5VSR9 72 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 NEXN-AS1Q8NBZ9 246 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 RAXQ9Y2V3 346 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 KALRNO60229 2985 aa15.17■□□□□ 0.02
SDF4-205ENST00000465727 SCGB3A1Q96QR1 104 aa15.16■□□□□ 0.02
SDF4-205ENST00000465727 AGPAT4-IT1Q9H0P7 198 aa15.16■□□□□ 0.02
SDF4-205ENST00000465727 ODF3BA8MYP8 253 aa15.16■□□□□ 0.02
SDF4-205ENST00000465727 VCX2Q9H322 139 aa15.16■□□□□ 0.02
SDF4-205ENST00000465727 SPTBN2O15020 2390 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 C8orf86Q6ZUL3 223 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 ZNF418Q8TF45 676 aaPredicted RBP15.15■□□□□ 0.02
SDF4-205ENST00000465727 C20orf78Q9BR46 151 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 SPAARA0A1B0GVQ0 90 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 LYNX1G3V0Z9 82 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 LYNX1P0DP58 116 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 UBE2D1P51668 147 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 RNF182Q8N6D2 247 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 DEFB124Q8NES8 71 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 CLUHP3Q96NS8 147 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 ZFAND3Q9H8U3 227 aa15.15■□□□□ 0.02
SDF4-205ENST00000465727 BOD1L1Q8NFC6 3051 aa15.14■□□□□ 0.01
SDF4-205ENST00000465727 M0R1W7 72 aa15.14■□□□□ 0.01
SDF4-205ENST00000465727 SYT8Q8NBV8 401 aa15.14■□□□□ 0.01
SDF4-205ENST00000465727 CNOT1A5YKK6 2376 aaKnown RBP15.14■□□□□ 0.01
SDF4-205ENST00000465727 C9orf47Q6ZRZ4 202 aa15.13■□□□□ 0.01
SDF4-205ENST00000465727 Q8N6K4 173 aa15.13■□□□□ 0.01
SDF4-205ENST00000465727 CDIP1Q9H305 208 aa15.13■□□□□ 0.01
SDF4-205ENST00000465727 CRYBA4P53673 196 aa15.13■□□□□ 0.01
SDF4-205ENST00000465727 GEMIN7Q9H840 131 aaKnown RBP15.13■□□□□ 0.01
SDF4-205ENST00000465727 OOSP1A8MZH6 123 aa15.12■□□□□ 0.01
SDF4-205ENST00000465727 CD3EP07766 207 aa15.12■□□□□ 0.01
SDF4-205ENST00000465727 SMCPP49901 116 aaPredicted RBP15.12■□□□□ 0.01
SDF4-205ENST00000465727 SUMO2P61956 95 aaKnown RBP15.12■□□□□ 0.01
SDF4-205ENST00000465727 PRADC1Q9BSG0 188 aa15.12■□□□□ 0.01
SDF4-205ENST00000465727 ASPMQ8IZT6 3477 aa15.12■□□□□ 0.01
SDF4-205ENST00000465727 CENPVL3A0A0U1RRI6 287 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms