RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 URB1-AS1Q96HZ7 61 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 PRR25Q96S07 402 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 SLC50A1Q9BRV3 221 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 ZNF702PQ9H963 129 aa7.6□□□□□ -1.19
PTPRD-207ENST00000463477 C2orf70A6NJV1 201 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 FAM223BA6NKX1 122 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 M0R2Z0 102 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 CRXO43186 299 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-207ENST00000463477 IGHG4P01861 327 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 NTF3P20783 257 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 BMI1P35226 326 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 ECSCRQ19T08 205 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
PTPRD-207ENST00000463477 FAM223AQ8IWN6 122 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 FAM19A2Q8N3H0 131 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
PTPRD-207ENST00000463477 MRPL53Q96EL3 112 aaKnown RBP7.59□□□□□ -1.19
PTPRD-207ENST00000463477 MGAM2Q2M2H8 2515 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 IGHV3-23P01764 117 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 ARMS2P0C7Q2 107 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 BTF3P20290 206 aaKnown RBP7.58□□□□□ -1.2
PTPRD-207ENST00000463477 GPR183P32249 361 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
PTPRD-207ENST00000463477 TDRG1Q3Y452 100 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 Q6ZS46 218 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 CCDC140Q96MF4 163 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 C8orf49Q96NF6 230 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 PAM16Q9Y3D7 125 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 U3KQE9 123 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
PTPRD-207ENST00000463477 TMEM189A5PLL7 270 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 H3BUA1 57 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 SH2D1AO60880 128 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 CLEC3BP05452 202 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 LINC00614P0C842 121 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 SSTP61278 116 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 KLHDC1Q8N7A1 406 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 FBN3Q75N90 2809 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 WNK1Q9H4A3 2382 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 EREGO14944 169 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 IGF1P05019 195 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 PRR31Q5SQ13 230 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 PPP1R14DQ9NXH3 145 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 U3KQK5 164 aa7.57□□□□□ -1.2
PTPRD-207ENST00000463477 PKD1L1Q8TDX9 2849 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 IGKV2-40A0A087WW87 121 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-207ENST00000463477 TRAV41A0A0B4J266 112 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 IGHV1-24A0A0C4DH33 117 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 A0A1B0GV90 55 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 G3V318 75 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 IGKV2D-40P01614 121 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-207ENST00000463477 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 METTL26Q96S19 204 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 CNFNQ9BYD5 112 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
PTPRD-207ENST00000463477 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
PTPRD-207ENST00000463477 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
PTPRD-207ENST00000463477 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
PTPRD-207ENST00000463477 NUTF2P61970 127 aaKnown RBP7.55□□□□□ -1.2
PTPRD-207ENST00000463477 CLEC19AQ6UXS0 136 aa7.55□□□□□ -1.2
PTPRD-207ENST00000463477 ZNF705AQ6ZN79 300 aaPredicted RBP7.55□□□□□ -1.2
PTPRD-207ENST00000463477 ZNF580Q9UK33 172 aa7.55□□□□□ -1.2
PTPRD-207ENST00000463477 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 FABP5P3A8MUU1 101 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 IGHG2P01859 326 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 FAM104BQ5XKR9 115 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 LYZL1Q6UWQ5 148 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 VGLL1Q99990 258 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 M0QZ24 198 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 HIST1H1AQ02539 215 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-207ENST00000463477 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 ASCL2Q99929 193 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 HSPB8Q9UJY1 196 aa7.54□□□□□ -1.2
PTPRD-207ENST00000463477 VWFP04275 2813 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 SYS1-DBNDD2H3BUS1 97 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 PPIFP30405 207 aaKnown RBP7.53□□□□□ -1.2
PTPRD-207ENST00000463477 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-207ENST00000463477 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 AP5S1Q9NUS5 200 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 LENEPQ9Y5L5 61 aa7.53□□□□□ -1.2
PTPRD-207ENST00000463477 NDUFA4O00483 81 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 TRGV3P03979 118 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 ZNF575Q86XF7 245 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 GLMPQ8WWB7 406 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms