RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 FAM74A1Q5RGS3 127 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 AKR1C8PQ5T2L2 129 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 EIF5AL1Q6IS14 154 aaKnown RBP3.73□□□□□ -1.81
PDCD4-204ENST00000462577 SSX7Q7RTT5 188 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 BAP18Q8IXM2 172 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 C1orf158Q8N1D5 194 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 EXOC3-AS1Q8N2X6 119 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 C9orf62Q8N4C0 152 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 MBD3L1Q8WWY6 194 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 LINC00467Q9BRT7 94 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 TCEAL7Q9BRU2 100 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 ZNF471Q9BX82 626 aaPredicted RBP3.73□□□□□ -1.81
PDCD4-204ENST00000462577 NKX6-2Q9C056 277 aaPredicted RBP3.73□□□□□ -1.81
PDCD4-204ENST00000462577 ZNF492Q9P255 531 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 COX11Q9Y6N1 276 aa3.73□□□□□ -1.81
PDCD4-204ENST00000462577 MUC4Q99102 2169 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 IGHV4-28A0A0C4DH34 117 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 TEX48A0A1B0GUV7 120 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 A0A1B0GVG6 124 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 MAP1LC3B2A6NCE7 125 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 M0R2Z0 102 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 IGKV3-20P01619 116 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 SNRPCP09234 159 aaKnown RBP3.72□□□□□ -1.81
PDCD4-204ENST00000462577 RBMY1A1P0DJD3 496 aaKnown RBP3.72□□□□□ -1.81
PDCD4-204ENST00000462577 RBMY1CP0DJD4 496 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 CT45A10P0DMU9 189 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 MALP21145 153 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 CSN1S1P47710 185 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 FHITP49789 147 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 ZNF138P52744 262 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 RANP62826 216 aaKnown RBP3.72□□□□□ -1.81
PDCD4-204ENST00000462577 RBMY1FQ15415 496 aaKnown RBP3.72□□□□□ -1.81
PDCD4-204ENST00000462577 ZFP69Q49AA0 526 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 TMEM78Q5T7P6 136 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 SLC51BQ86UW2 128 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 C5orf17Q8NAS9 161 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 MAP1LC3BQ9GZQ8 125 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 AGPAT4-IT1Q9H0P7 198 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
PDCD4-204ENST00000462577 TENM2Q9NT68 2774 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 IGKV2-40A0A087WW87 121 aaPredicted RBP3.71□□□□□ -1.82
PDCD4-204ENST00000462577 TRAV1-1A0A0B4J248 108 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 C7orf71A4D174 169 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 PGPA6NDG6 321 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 NUPR2A6NF83 97 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 FAM74A7A6NL05 159 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 GGTLC3B5MD39 225 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 H7BYZ3 331 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 HMGB3O15347 200 aaKnown RBP3.71□□□□□ -1.82
PDCD4-204ENST00000462577 ZNF324O75467 553 aaPredicted RBP3.71□□□□□ -1.82
PDCD4-204ENST00000462577 IGKV2D-40P01614 121 aaPredicted RBP3.71□□□□□ -1.82
PDCD4-204ENST00000462577 HBE1P02100 147 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 TCRAP04437 139 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 SULT1A2P50226 295 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 PPT1P50897 306 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 FXYD7P58549 80 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 TAS2R60P59551 318 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 CD300CQ08708 224 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 PMS2P11Q13670 270 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 RRN3P1Q2M238 152 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 CASC10Q5T4H9 136 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 GFI1BQ5VTD9 330 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 ZFAND2AQ8N6M9 145 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 TMEM75Q8N9X5 138 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 C11orf45Q8TAV5 145 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 CMTM2Q8TAZ6 248 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 VGLL1Q99990 258 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 PYGO2Q9BRQ0 406 aa3.71□□□□□ -1.82
PDCD4-204ENST00000462577 TRAV12-2A0A075B6T6 113 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 TRBV6-1A0A0K0K1D8 114 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 LOC102723971A0A1B0GUV8 181 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 PLAC8L1A1L4L8 177 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 PRSS29PA6NIE9 313 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 C11orf94C9JXX5 98 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 K7EQM0 130 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 EIF3GO75821 320 aaKnown RBP eCLIP3.7□□□□□ -1.82
PDCD4-204ENST00000462577 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 ERCC8Q13216 396 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 Q6AWC8 147 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 COX8CQ7Z4L0 72 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 CCDC28AQ8IWP9 274 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 CYB561D1Q8N8Q1 229 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 RNASE8Q8TDE3 154 aaKnown RBP3.7□□□□□ -1.82
PDCD4-204ENST00000462577 TMEM263Q8WUH6 116 aaKnown RBP3.7□□□□□ -1.82
PDCD4-204ENST00000462577 HIST1H2BAQ96A08 127 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 C16orf74Q96GX8 76 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 NIPSNAP3BQ9BS92 247 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 ATG101Q9BSB4 218 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 TMEM208Q9BTX3 173 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 C1orf43Q9BWL3 253 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 TP53TG3Q9ULZ0 132 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 EPDR1Q9UM22 224 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 KLF12Q9Y4X4 402 aa3.7□□□□□ -1.82
PDCD4-204ENST00000462577 YTHDF2Q9Y5A9 579 aaKnown RBP3.7□□□□□ -1.82
PDCD4-204ENST00000462577 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
PDCD4-204ENST00000462577 TRAV12-3A0A0B4J271 114 aa3.69□□□□□ -1.82
PDCD4-204ENST00000462577 CXorf65A6NEN9 183 aa3.69□□□□□ -1.82
PDCD4-204ENST00000462577 LYRM9A8MSI8 78 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms