RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ATP7AQ04656 1500 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 EMX2Q04743 252 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 TROQ12816 1431 aaPredicted RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 ESRGQ1W209 222 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 OCIAD2Q56VL3 154 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 RNASE10Q5GAN6 216 aaKnown RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 OVOS2Q6IE36 1432 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 GLIPR1L1Q6UWM5 242 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 PATE2Q6UY27 113 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 IDO2Q6ZQW0 420 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 PHF5AQ7RTV0 110 aaKnown RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 PLEKHH2Q8IVE3 1493 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 SAMD9LQ8IVG5 1584 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 UBR1Q8IWV7 1749 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 Q8IYB0 196 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 C1orf54Q8WWF1 131 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 CHCHD1Q96BP2 118 aaKnown RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 RETNLBQ9BQ08 111 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 UGGT1Q9NYU2 1555 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 DSPPQ9NZW4 1301 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 COMMD3Q9UBI1 195 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 KIAA1107Q9UPP5 1409 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 MYH2Q9UKX2 1941 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 LRP6O75581 1613 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 NHSL1Q5SYE7 1610 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TIAM1Q13009 1591 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 NWD1Q149M9 1564 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SETBP1Q9Y6X0 1596 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SLIT1O75093 1534 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 PRDM15P57071 1507 aaPredicted RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 MAP3K1Q13233 1512 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SYCP2Q9BX26 1530 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 NKTRP30414 1462 aaKnown RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 CAMSAP2Q08AD1 1489 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 CCDC18Q5T9S5 1454 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 EEA1Q15075 1411 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TRAV12-1A0A0B4J245 112 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TRAV1-1A0A0B4J248 108 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 LOC107984156A0A0G2JMH3 177 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TRBV7-6A0A0J9YX20 115 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 C2orf70A6NJV1 201 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 A8MWV9 139 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 ZNF670-ZNF695F2Z2N8 137 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SNAPC5O75971 98 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 HBDP02042 147 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 RNASE3P12724 160 aaKnown RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 AKR1D1P51857 326 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SNRPD3P62318 126 aaKnown RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 KLRD1Q13241 179 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 CLLU1Q5K131 121 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 HAGHLQ6PII5 290 aaPredicted RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 ARL17AQ8IVW1 177 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 MMGT1Q8N4V1 131 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 OR4S1Q8NGB4 309 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 OR5A2Q8NGI9 324 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 OR5D16Q8NGK9 328 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 OR5D14Q8NGL3 314 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 NAT14Q8WUY8 206 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM203Q969S6 136 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 LINC00526Q96FQ7 95 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 C14orf144Q96I85 54 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SCN3BQ9NY72 215 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 RP1L1Q8IWN7 2480 aaPredicted RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 MUC6Q6W4X9 2439 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 ZNF106Q9H2Y7 1883 aaKnown RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SPHKAPQ2M3C7 1700 aa1.01□□□□□ -2.25
HDAC6-212ENST00000461608 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 MARF1Q9Y4F3 1742 aaKnown RBP1.01□□□□□ -2.25
HDAC6-212ENST00000461608 TET3O43151 1660 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 MROH1Q8NDA8 1641 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 EIF2AK4Q9P2K8 1649 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 DIP2AQ14689 1571 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 NCOA2Q15596 1464 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 BAZ2BQ9UIF8 2168 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 DISP2A7MBM2 1401 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 ARHGAP31Q2M1Z3 1444 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TRAV27A0A087WT01 109 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 LOC110117498A0A087WWA1 95 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 IGKV2D-26A0A0A0MRZ7 120 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TRAV16A0A0A6YYK6 109 aaPredicted RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 A0A0G2JMM0 328 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 A0A1W2PPB8 328 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 C20orf202A1L168 122 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 FAM92AA1XBS5 289 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 C9orf170A2RU37 121 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 OR2T8A6NH00 312 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 KIR3DP1A8MWS1 328 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 CCDC179H3BU77 68 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 IFNA4P05014 189 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 CD14P08571 375 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TSPAN19P0C672 248 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 SLC25A4P12235 298 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TPT1P13693 172 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 HLA-DRB4P13762 266 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 HIST1H1DP16402 221 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 FGF7P21781 194 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 SSR2P43308 183 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 PCBD1P61457 104 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 BLCAPP62952 87 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms