RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NREPQ16612 68 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 RNF144BQ7Z419 303 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 RNF152Q8N8N0 203 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 TNS1Q9HBL0 1735 aaKnown RBP7.13□□□□□ -1.27
BRCA1-205ENST00000461221 IGKV1-6A0A0C4DH72 117 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
BRCA1-205ENST00000461221 SPATA25Q9BR10 227 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 GBF1Q92538 1859 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 PARP14Q460N5 1801 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 LTAP01374 205 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 Q6ZVH6 145 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 IGFBPL1Q8WX77 278 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
BRCA1-205ENST00000461221 DKK2Q9UBU2 259 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 U3KQE9 123 aa7.13□□□□□ -1.27
BRCA1-205ENST00000461221 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-205ENST00000461221 C9JQL5 133 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 C17orf58Q2M2W7 97 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 FXYD5Q96DB9 178 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 ZNRD1Q9P1U0 126 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 ICOSQ9Y6W8 199 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 B5MCH6 92 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 J3KT08 172 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 A0A0J9YY99 117 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 PROP1O75360 226 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-205ENST00000461221 ZNF726P1Q15940 193 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 Q6ZQT7 251 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 WIPF2Q8TF74 440 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-205ENST00000461221 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
BRCA1-205ENST00000461221 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-205ENST00000461221 IGKV2-29A2NJV5 120 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-205ENST00000461221 WIPF3A6NGB9 483 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 MRPL23Q16540 153 aaKnown RBP7.11□□□□□ -1.27
BRCA1-205ENST00000461221 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 Q9HAA7 133 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 IGHV4-28A0A0C4DH34 117 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 IGHV2-70P01814 119 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 IGHV4-4A0A075B6R2 117 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-205ENST00000461221 COX7A2LO14548 114 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 ZFP2Q6ZN57 461 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 CCL18P55774 89 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 UBR3Q6ZT12 1888 aa7.11□□□□□ -1.27
BRCA1-205ENST00000461221 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 SND1-IT1Q9HBX3 110 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 AHCTF1Q8WYP5 2266 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 K7EQD1 137 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 UBE2AP49459 152 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 TIMM17AQ99595 171 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 IGLL5B9A064 214 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 C9orf66Q5T8R8 295 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 DAZ2Q13117 558 aaKnown RBP7.1□□□□□ -1.27
BRCA1-205ENST00000461221 DUX4L9Q6RFH8 374 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-205ENST00000461221 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
BRCA1-205ENST00000461221 DAZ3Q9NR90 486 aaKnown RBP7.1□□□□□ -1.27
BRCA1-205ENST00000461221 LRRC37AA6NMS7 1700 aa7.1□□□□□ -1.27
BRCA1-205ENST00000461221 RALGAPA2Q2PPJ7 1873 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 PSME4Q14997 1843 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 C10orf91Q5T1B1 145 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 HIST2H2BCQ6DN03 193 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
BRCA1-205ENST00000461221 K7ENP7 123 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 IGHV2-5P01817 119 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 ATP5G1P05496 136 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 MAPK1IP1LQ8NDC0 245 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 ATP6V0E2Q8NHE4 81 aa7.09□□□□□ -1.27
BRCA1-205ENST00000461221 GNRH2O43555 120 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 PRB1P04280 392 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 ZNF491Q8N8L2 437 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 NDUFA1O15239 70 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 CCL25O15444 150 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 SPART-AS1P0CW21 52 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 CXCL5P42830 114 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 VPREB3Q9UKI3 123 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 ARHGEF17Q96PE2 2063 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-205ENST00000461221 THSD7AQ9UPZ6 1657 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 SCN10AQ9Y5Y9 1956 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 C15orf65H3BRN8 121 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 TPSG1Q9NRR2 321 aa7.08□□□□□ -1.28
BRCA1-205ENST00000461221 GYPEP15421 78 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 DEFB125Q8N687 156 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 CCL24O00175 119 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 KIF26BQ2KJY2 2108 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 CHD5Q8TDI0 1954 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms