RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 Q5XG85 94 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 C10orf99Q6UWK7 81 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 ZNF695Q8IW36 515 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 FAM71E2Q8N5Q1 922 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 C5orf56Q8N8D9 126 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 OR2G3Q8NGZ4 309 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 OR2T10Q8NGZ9 312 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 SCGB3A2Q96PL1 93 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 LINC01587Q99440 93 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 SLC25A39Q9BZJ4 359 aaPredicted RBP3.79□□□□□ -1.8
SF3A3-202ENST00000460925 RNASE7Q9H1E1 156 aaKnown RBP3.79□□□□□ -1.8
SF3A3-202ENST00000460925 BET1LQ9NYM9 111 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 CACNG5Q9UF02 275 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 CACFD1Q9UGQ2 172 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 HIGD1AQ9Y241 93 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
SF3A3-202ENST00000460925 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 IGLC7A0M8Q6 106 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 C7orf77A4D0Y5 90 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 HMSDA8MTL9 139 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 SNURFLB1AK76 121 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 H3BQ15 152 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 M0R2Z0 102 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 BMPR1BO00238 502 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 CREBL2O60519 120 aaPredicted RBP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 MPDU1O75352 247 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 DUS4LO95620 317 aaKnown RBP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 IL5P05113 134 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 IAPPP10997 89 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 CXCL3P19876 107 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 CTRLP40313 264 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 DYNLT3P51808 116 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 YPEL3P61236 119 aaPredicted RBP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 ERVK-16P61578 105 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 ECSCRQ19T08 205 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 ACOT6Q3I5F7 207 aaPredicted RBP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 NMSQ5H8A3 153 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 GTF2H5Q6ZYL4 71 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 FAM24BQ8N5W8 94 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 WDR61Q9GZS3 305 aaKnown RBP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 NPVFQ9HCQ7 196 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 PARP11Q9NR21 331 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 COMMD9Q9P000 198 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 NIPBLQ6KC79 2804 aaeCLIP3.78□□□□□ -1.8
SF3A3-202ENST00000460925 JMJD1CQ15652 2540 aa3.78□□□□□ -1.8
SF3A3-202ENST00000460925 ANK2Q01484 3957 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 A0A0B4J2A0 478 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 G3V318 75 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 UPK2O00526 184 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 AGPAT2O15120 278 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 OR2A4O95047 310 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
SF3A3-202ENST00000460925 HRASP01112 189 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 PRH1P02810 166 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 TRGC1P0CF51 173 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 CT45A10P0DMU9 189 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 LINC00694P0DN24 101 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 H2BFSP57053 126 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 PSG9Q00887 426 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 VMA21Q3ZAQ7 101 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 LRRC37A5PQ49AS3 106 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 FAM106AQ4KMX7 169 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 AMMECR1LQ6DCA0 310 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 PPP1R27Q86WC6 154 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 TTC9CQ8N5M4 171 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 TEX29Q8N6K0 151 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.77□□□□□ -1.81
SF3A3-202ENST00000460925 NPBQ8NG41 125 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 OR10G8Q8NGN5 311 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 OR2K2Q8NGT1 345 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 C11orf45Q8TAV5 145 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 PHYHIPLQ96FC7 376 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 OR2A7Q96R45 310 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 SPIN2AQ99865 258 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 SPIN2BQ9BPZ2 258 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 NIPSNAP3BQ9BS92 247 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 SH3BGRL3Q9H299 93 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 FKBP11Q9NYL4 201 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 UQCR10Q9UDW1 63 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 SHPKQ9UHJ6 478 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 FUT9Q9Y231 359 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 PKIGQ9Y2B9 76 aa3.77□□□□□ -1.81
SF3A3-202ENST00000460925 LSM5Q9Y4Y9 91 aaKnown RBP3.77□□□□□ -1.81
SF3A3-202ENST00000460925 FBN1P35555 2871 aaKnown RBP3.77□□□□□ -1.81
SF3A3-202ENST00000460925 TRRAPQ9Y4A5 3859 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 IGHV3-21A0A0B4J1V1 117 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 TEX50A0A1B0GTY4 177 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 SNRPGP15A8MWD9 76 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 H3BP45 60 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 SSSCA1O60232 199 aa3.76□□□□□ -1.81
SF3A3-202ENST00000460925 HLA-DRB1P01911 266 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms