RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, human

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQA1-205	ENST00000460633	PSG3	Q16557	428 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	ZNF524	Q96C55	264 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGHV3-35	A0A0C4DH35	117 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	LEPROT	O15243	131 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	NDUFB1	O75438	58 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGHV4-39	P01824	125 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	GLMP	Q8WWB7	406 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGHV4-30-2	A0A087WSY4	118 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	TRAV8-3	A0A0A6YYJ7	113 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGKV1-6	A0A0C4DH72	117 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	VWC2L	B2RUY7	222 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	NUPR1	O60356	82 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	HS3ST6	Q96QI5	342 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	LINC00474	Q9P2X8	69 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633		D6R8Y8	96 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	CD24	P25063	80 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	TEX36	Q5VZQ5	186 aa		4.98	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	ASXL3	Q9C0F0	2248 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	LINC00473	A8K010	186 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	SPINK8	P0C7L1	97 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	ZFP36	P26651	326 aa	Known RBP	4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	ZFAND6	Q6FIF0	208 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633		Q6ZS49	121 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGF2BP2-AS1	Q96M15	143 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	PYGO2	Q9BRQ0	406 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	SEC16A	O15027	2179 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	EML5	Q05BV3	1969 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGHV7-4-1	A0A0J9YVY3	117 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	GAGE12H	A6NDE8	117 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633		M0QXV9	152 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	DSCR8	Q96T75	97 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	XCL2	Q9UBD3	114 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	PSG8	Q9UQ74	426 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	C9orf118	A6NHY6	69 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	SCRT1	Q9BWW7	348 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633		V9GYV3	84 aa		4.97	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	IGHV1OR15-1	A0A075B7D0	117 aa		4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	SRRM4	A7MD48	611 aa	Known RBP	4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	LYRM9	A8MSI8	78 aa		4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	FCN3	O75636	299 aa		4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	NCR2	O95944	276 aa		4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	SLURP1	P55000	103 aa		4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	FOXG1	P55316	489 aa	Predicted RBP	4.96	□□□□□ -1.61
HLA-DQA1-205	ENST00000460633	MMP23A	O75900	390 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TAL2	Q16559	108 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	COA6	Q5JTJ3	125 aa	Known RBP	4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ASPHD1	Q5U4P2	390 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TRBV6-6	A0A0A6YYG2	114 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE7	O76087	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE12F	P0CL80	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE12G	P0CL81	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE12I	P0CL82	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GYPE	P15421	78 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CD300E	Q496F6	205 aa	Predicted RBP	4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	BVES-AS1	Q5T3Y7	98 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RPRML	Q8N4K4	120 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SPANXD	Q9BXN6	97 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SIRPD	Q9H106	197 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TRAV26-2	A0A0B4J265	109 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGLC7	A0M8Q6	106 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		Q6P435	159 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV3OR16-8	A0A075B7F1	116 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TRAV8-4	A0A0B4J246	113 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ETDC	A0A1B0GVM5	59 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ATP6V0E1	O15342	81 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGKV1-39	P01597	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV4-59	P01825	116 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGKV1D-39	P04432	117 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	MIF	P14174	115 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE2B	Q13066	116 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	POU2AF1	Q16633	256 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE2E	Q4V326	116 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	EXOC3-AS1	Q8N2X6	119 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	MRPL53	Q96EL3	112 aa	Known RBP	4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE2D	Q9UEU5	116 aa		4.96	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TRAV12-3	A0A0B4J271	114 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV4-61	A0A0C4DH41	118 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV3-53	P01767	116 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	IGHV4-31	P0DP07	118 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	PROK2	Q9HC23	129 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		K7EP34	96 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	MLANA	Q16655	118 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	NEGR1	Q7Z3B1	354 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	FAM110A	Q9BQ89	295 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633		H0YJW9	148 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TNFRSF13B	O14836	293 aa	Predicted RBP	4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	HOXB4	P17483	251 aa	Predicted RBP	4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	CXCL5	P42830	114 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LAGE3	Q14657	143 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LYZL1	Q6UWQ5	148 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LY6G5B	Q8NDX9	201 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	UNC13C	Q8NB66	2214 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE12J	A6NER3	117 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	TCRA	P04437	139 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	GAGE4	Q13068	117 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	LINC00527	Q9UJ94	153 aa		4.95	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	RP1	P56715	2156 aa		4.94	□□□□□ -1.62
HLA-DQA1-205	ENST00000460633	ANG	P03950	147 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms