RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PCBD1P61457 104 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 MRPS36P82909 103 aaKnown RBP2.34□□□□□ -2.03
CCDC50-203ENST00000460064 KHDC3LQ587J8 217 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 DYNAPQ8N1N2 210 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 COPS9Q8WXC6 57 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 CHCHD1Q96BP2 118 aaKnown RBP2.34□□□□□ -2.03
CCDC50-203ENST00000460064 NABP2Q9BQ15 211 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 VAMP8Q9BV40 100 aa2.34□□□□□ -2.03
CCDC50-203ENST00000460064 MYH9P35579 1960 aaKnown RBP2.34□□□□□ -2.04
CCDC50-203ENST00000460064 ANKRD36BQ8N2N9 1353 aa2.34□□□□□ -2.04
CCDC50-203ENST00000460064 GLI3P10071 1580 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 LOC107986453A0A1B0GWG9 222 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 C11orf86A6NJI1 115 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 B4DSR2 109 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 M0R2P5 195 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 SDCBPO00560 298 aaPredicted RBP2.33□□□□□ -2.04
CCDC50-203ENST00000460064 TIMM17BO60830 172 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 PMP2P02689 132 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 SHBGP04278 402 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 MSMBP08118 114 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 FABP4P15090 132 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 ZNF846Q147U1 533 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 FAM74A1Q5RGS3 127 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.33□□□□□ -2.04
CCDC50-203ENST00000460064 Q8IYB0 196 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 TXNDC17Q9BRA2 123 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 NOP16Q9Y3C1 178 aaKnown RBP2.33□□□□□ -2.04
CCDC50-203ENST00000460064 MYO9BQ13459 2157 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 TEX14Q8IWB6 1497 aa2.33□□□□□ -2.04
CCDC50-203ENST00000460064 POLEQ07864 2286 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 MUC21A0A140T8X8 626 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 SMIM31A0A1B0GVY4 71 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 IGLV1-51P01701 117 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 RBP4P02753 201 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 CLPSP04118 112 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 ZNF705BP0CI00 300 aaPredicted RBP2.32□□□□□ -2.04
CCDC50-203ENST00000460064 CD24P25063 80 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 LSM3P62310 102 aaKnown RBP2.32□□□□□ -2.04
CCDC50-203ENST00000460064 CIRBPQ14011 172 aaKnown RBP2.32□□□□□ -2.04
CCDC50-203ENST00000460064 OR2T2Q6IF00 324 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 LYZL1Q6UWQ5 148 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 OR5AK2Q8NH90 309 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 C10orf105Q8TEF2 133 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 AQP10Q96PS8 301 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 MED9Q9NWA0 146 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 SLX4Q8IY92 1834 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 SCN8AQ9UQD0 1980 aa2.32□□□□□ -2.04
CCDC50-203ENST00000460064 ANAPC1Q9H1A4 1944 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 MYH13Q9UKX3 1938 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 GNRH2O43555 120 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 CREBL2O60519 120 aaPredicted RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 EDF1O60869 148 aaKnown RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 HYPMO75409 117 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 GYPBP06028 91 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 HINT1P49773 126 aaPredicted RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 DPPA3Q6W0C5 159 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 POP5Q969H6 163 aaKnown RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 DSCR8Q96T75 97 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 ATG5Q9H1Y0 275 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 NPVFQ9HCQ7 196 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 TAS2R4Q9NYW5 299 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 HHLA3Q9XRX5 114 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 COL4A2P08572 1712 aa2.31□□□□□ -2.04
CCDC50-203ENST00000460064 MYO5AQ9Y4I1 1855 aaKnown RBP2.31□□□□□ -2.04
CCDC50-203ENST00000460064 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 ZNF736B4DX44 427 aaPredicted RBP2.3□□□□□ -2.04
CCDC50-203ENST00000460064 NDUFB6O95139 128 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 SAA1P0DJI8 122 aaPredicted RBP2.3□□□□□ -2.04
CCDC50-203ENST00000460064 COX6A1P12074 109 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 C6orf52Q5T4I8 152 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 Q6ZQT0 140 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 Q8N814 137 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 RAB37Q96AX2 223 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 HYLS1Q96M11 299 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 LINC00052Q96N35 136 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 TTTY12Q9BZ98 90 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 CXCL16Q9H2A7 254 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 BET1LQ9NYM9 111 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 TPRKBQ9Y3C4 175 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 FAM215AQ9Y5M1 114 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 RRBP1Q9P2E9 1410 aaKnown RBP2.3□□□□□ -2.04
CCDC50-203ENST00000460064 LAMC3Q9Y6N6 1575 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 CCDC88AQ3V6T2 1871 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
CCDC50-203ENST00000460064 ARHGAP32A7KAX9 2087 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 TRAV1-1A0A0B4J248 108 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 H3BQ15 152 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 YPEL1O60688 119 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 LINC00032P0C843 101 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 NFYAP23511 347 aaPredicted RBP2.29□□□□□ -2.04
CCDC50-203ENST00000460064 CKS2P33552 79 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 ETV6P41212 452 aa2.29□□□□□ -2.04
CCDC50-203ENST00000460064 NPC2P61916 151 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms