RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ZGRF1Q86YA3 2104 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 B9A039 149 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 ATOX1O00244 68 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 IGHV1-8P0DP01 117 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 RNF114Q9Y508 228 aa9.84□□□□□ -0.83
NEDD4L-208ENST00000456173 TRGV11A0A075B6L2 103 aa9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 ACYP1P07311 99 aa9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 YLPM1P49750 1951 aaKnown RBP9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 M0R1W7 72 aa9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 CCL21O00585 134 aa9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 COLCA1Q6ZS62 124 aa9.83□□□□□ -0.84
NEDD4L-208ENST00000456173 ZNF134P52741 427 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 MSRB1Q9NZV6 116 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 NTN3O00634 580 aaPredicted RBP9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 EGR2P11161 476 aaPredicted RBP9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 C9orf139Q6ZV77 190 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 LINC01560Q8TB33 94 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 BRK1Q8WUW1 75 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 PCNTO95613 3336 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 FDCSPQ8NFU4 85 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 GAFA1Q96PS6 74 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 DSCAML1Q8TD84 2053 aa9.82□□□□□ -0.84
NEDD4L-208ENST00000456173 DYSFO75923 2080 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 DKK1O94907 266 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 NDUFC2O95298 119 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 WDR86Q86TI4 376 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 SPRY2O43597 315 aa9.81□□□□□ -0.84
NEDD4L-208ENST00000456173 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 SPRR3Q9UBC9 169 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 SHISA9B4DS77 424 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 IGLV3-1P01715 115 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 PFN2P35080 140 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 LOXL1Q08397 574 aaPredicted RBP9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 TCL1BO95988 128 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 C11orf1Q9H5F2 150 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 TPSG1Q9NRR2 321 aa9.8□□□□□ -0.84
NEDD4L-208ENST00000456173 WDR81Q562E7 1941 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 SVIPQ8NHG7 77 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 E9PLD3 99 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 ATRXP46100 2492 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 IGHV3-53P01767 116 aa9.79□□□□□ -0.84
NEDD4L-208ENST00000456173 ODF1Q14990 250 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 GDF5OSQ5U4N7 250 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 ZFP2Q6ZN57 461 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 RLFQ13129 1914 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 ZSWIM8A7E2V4 1837 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 INSP01308 110 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 B3GALT5-AS1P59052 145 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
NEDD4L-208ENST00000456173 H3BRN7 92 aa9.77□□□□□ -0.84
NEDD4L-208ENST00000456173 Q8N1Y9 231 aa9.77□□□□□ -0.84
NEDD4L-208ENST00000456173 MED13LQ71F56 2210 aa9.77□□□□□ -0.84
NEDD4L-208ENST00000456173 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 TRBV10-2A0A0K0K1G8 114 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 C15orf65H3BRN8 121 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 INSL3P51460 131 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 CLEC2BQ92478 149 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 BDP1A6H8Y1 2624 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 TRGV4A0A0C4DH28 118 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 M0QXV9 152 aa9.77□□□□□ -0.85
NEDD4L-208ENST00000456173 I3L3M4 83 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 K7EM74 188 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 THAP8Q8NA92 274 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 RBAKDNA6NC62 111 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 CRYGBP07316 175 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 ZNF503-AS2A6NEH8 195 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 PRB2P02812 416 aaPredicted RBP9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 PROK2Q9HC23 129 aa9.76□□□□□ -0.85
NEDD4L-208ENST00000456173 TEX49A0A1B0GTD5 131 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 TEX36Q5VZQ5 186 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 CACNA1BQ00975 2339 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 C17orf58Q2M2W7 97 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 LYPD2Q6UXB3 125 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 CFHR4Q92496 578 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 PCNX2A6NKB5 2137 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 CRLF1O75462 422 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 XGP55808 180 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 HERVK_113P63121 156 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
NEDD4L-208ENST00000456173 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
NEDD4L-208ENST00000456173 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms