RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 C2orf16Q68DN1 1984 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SCN10AQ9Y5Y9 1956 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TRAV12-2A0A075B6T6 113 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TRAV2A0A0B4J234 112 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TRAV8-2A0A0B4J237 113 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TEX50A0A1B0GTY4 177 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TCRBV4S1A1TA0A5B7 111 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 hADV29S1A0JD25 119 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 EPOPA6NHQ4 379 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 A8MWV9 139 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 NDUFC2-KCTD14E9PQ53 114 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 K7ERJ3 54 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 LEPROTL1O95214 131 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SLC25A14O95258 325 aaPredicted RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TCL1BO95988 128 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 P01737 135 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 IGKCP01834 107 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SCGB1C2P0DMR2 95 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 IGHV3-43DP0DP04 118 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 PYYP10082 97 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 HLA-DRB4P13762 266 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 NPPCP23582 126 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 COL8A2P25067 703 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SSR2P43308 183 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 UBE2E1P51965 193 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 NCBP2P52298 156 aaKnown RBP eCLIP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 IGLV3-21P80748 117 aaPredicted RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 RSPO1Q2MKA7 263 aaPredicted RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 C12orf74Q32Q52 190 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 VMA21Q3ZAQ7 101 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 C9orf129Q5T035 196 aaKnown RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 HES3Q5TGS1 186 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 Q6P435 159 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 C22orf39Q6P5X5 142 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TRAPPC6BQ86SZ2 158 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 C14orf178Q8N769 122 aaPredicted RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 C20orf203Q8NBC4 194 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 FAM57AQ8TBR7 257 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SRSF12Q8WXF0 261 aaKnown RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TMEM158Q8WZ71 300 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 CHCHD1Q96BP2 118 aaKnown RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 ABHD14BQ96IU4 210 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 UBE2E2Q96LR5 201 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 LINC01600Q96MT4 127 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 DSCR8Q96T75 97 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 MRPL20Q9BYC9 149 aaKnown RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 ZNF442Q9H7R0 627 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 OTORQ9NRC9 128 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 ANAPC10Q9UM13 185 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 HHLA3Q9XRX5 114 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 F11RQ9Y624 299 aaKnown RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 HLA-DRB4X5D2U9 266 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 SIP14410 1827 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TET2Q6N021 2002 aaPredicted RBP1.42□□□□□ -2.18
LINC02540-201ENST00000455554 STRCP1A6NGW2 1772 aa1.42□□□□□ -2.18
LINC02540-201ENST00000455554 TMEM131Q92545 1883 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 NRXN3Q9Y4C0 1643 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 A0A0G2JMZ2 1700 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LRRC37A2A6NM11 1700 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LRRC37AA6NMS7 1700 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LCTP09848 1927 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 SMIM26A0A096LP01 95 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 TRAV8-1A0A0A6YYK1 113 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IGLV1-36A0A0B4J1U3 117 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 TRGV5A0A0B4J1U4 118 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 TRAV8-4A0A0B4J246 113 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IGHV1-24A0A0C4DH33 117 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IZUMO1RA6ND01 250 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 H3BT86 120 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 M0R1B8 84 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 SSSCA1O60232 199 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 PDCD6O75340 191 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LYZL6O75951 148 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 PPYP01298 95 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IGHG2P01859 326 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 GYPBP06028 91 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 COX6A1P12074 109 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IL9P15248 144 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 CTLA4P16410 223 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DYNLT3P51808 116 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 EFNA4P52798 201 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 FKBP1AP62942 108 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 SERF2P84101 59 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 ZNF816Q0VGE8 651 aaPredicted RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DAZ2Q13117 558 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 RTL8BQ17RB0 113 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DGAT2L6Q6ZPD8 337 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 Q6ZRU5 148 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 C6orf201Q7Z4U5 140 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DAZ4Q86SG3 579 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 OR5AS1Q8N127 324 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 RNF182Q8N6D2 247 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DCAF4L2Q8NA75 395 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 WFDC11Q8NEX6 87 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 OR5C1Q8NGR4 320 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 OR10AC1Q8NH08 325 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 C10orf105Q8TEF2 133 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 BORCS8Q96FH0 119 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms