RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NMES1Q9C002 83 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 AAMDCQ9H7C9 122 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 SCRT2Q9NQ03 307 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 NDUFA13Q9P0J0 144 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 VPS13BQ7Z7G8 4022 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 E5RGE8 158 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 RGS13O14921 159 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 SIVA1O15304 175 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 PAX4O43316 350 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 PRAF2O60831 178 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 SFTA3P0C7M3 94 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 ZNF266Q14584 549 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
GPC1-206ENST00000455111 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
GPC1-206ENST00000455111 DNAH10OSP0CZ25 163 aa10.89□□□□□ -0.67
GPC1-206ENST00000455111 XGP55808 180 aa10.89□□□□□ -0.67
GPC1-206ENST00000455111 RANP62826 216 aaKnown RBP10.89□□□□□ -0.67
GPC1-206ENST00000455111 WFDC1Q9HC57 220 aa10.89□□□□□ -0.67
GPC1-206ENST00000455111 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
GPC1-206ENST00000455111 ICOSQ9Y6W8 199 aa10.89□□□□□ -0.67
GPC1-206ENST00000455111 TRBV7-9A0A0J9YWB2 115 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 Q6AWC8 147 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 LINC00299Q6ZSB3 139 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 TVP23CQ96ET8 276 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
GPC1-206ENST00000455111 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 DIRC3C9JPN6 131 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 K7EQD1 137 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 UPK1BO75841 260 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 MZT2BQ6NZ67 158 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 SLC25A31Q9H0C2 315 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 HSPB11Q9Y547 144 aa10.87□□□□□ -0.67
GPC1-206ENST00000455111 LOC100131303A0A0U1RQF7 123 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 OR7C2O60412 319 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 ZNF415Q09FC8 603 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 RASL10AQ92737 203 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 ATP5SQ99766 215 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 ARPC5LQ9BPX5 153 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 SMIM3Q9BZL3 60 aa10.86□□□□□ -0.67
GPC1-206ENST00000455111 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 GNRH2O43555 120 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
GPC1-206ENST00000455111 TMEM183BQ1AE95 376 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 IQCF2Q8IXL9 164 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 TMEM183AQ8IXX5 376 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 OR10G4Q8NGN3 311 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 ENKURQ8TC29 256 aa10.85□□□□□ -0.67
GPC1-206ENST00000455111 MPC2O95563 127 aa10.84□□□□□ -0.67
GPC1-206ENST00000455111 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
GPC1-206ENST00000455111 MARVELD1Q9BSK0 173 aa10.84□□□□□ -0.67
GPC1-206ENST00000455111 A0A087WTM6 91 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
GPC1-206ENST00000455111 TDRG1Q3Y452 100 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
GPC1-206ENST00000455111 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 A6NHS1 94 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 F6UZH7 168 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 TYMSP04818 313 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 GYPEP15421 78 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 GNG5P63218 68 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 LENEPQ9Y5L5 61 aa10.82□□□□□ -0.68
GPC1-206ENST00000455111 TRGV4A0A0C4DH28 118 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 PGPA6NDG6 321 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 C17orf112F2Z3M2 114 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 RPL12P30050 165 aaKnown RBP10.81□□□□□ -0.68
GPC1-206ENST00000455111 RAB2AP61019 212 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 DPPA3Q6W0C5 159 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 TMED6Q8WW62 240 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 HYLS1Q96M11 299 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
GPC1-206ENST00000455111 HMGB3O15347 200 aaKnown RBP10.8□□□□□ -0.68
GPC1-206ENST00000455111 CSN1S1P47710 185 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
GPC1-206ENST00000455111 CYCSP99999 105 aaKnown RBP10.8□□□□□ -0.68
GPC1-206ENST00000455111 SLAQ13239 276 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 KHDC3LQ587J8 217 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 SGK494Q96LW2 274 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 SPXQ9BT56 116 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 OTORQ9NRC9 128 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
GPC1-206ENST00000455111 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 SRIP30626 198 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 ERVFC1-1P60608 527 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 GOLT1AQ6ZVE7 132 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 LY96Q9Y6Y9 160 aa10.79□□□□□ -0.68
GPC1-206ENST00000455111 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
GPC1-206ENST00000455111 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
GPC1-206ENST00000455111 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms