RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
ITGB4-202ENST00000449880 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
ITGB4-202ENST00000449880 B5MCH6 92 aa11.11□□□□□ -0.63
ITGB4-202ENST00000449880 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 CDK2AP2O75956 126 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 HEATR5AQ86XA9 2040 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 NUPR1O60356 82 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 CFC1P0CG37 223 aa11.1□□□□□ -0.63
ITGB4-202ENST00000449880 FAM110DQ8TAY7 271 aaPredicted RBP11.1□□□□□ -0.63
ITGB4-202ENST00000449880 J3QQQ9 107 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 LYPD6Q86Y78 171 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 ABCA1O95477 2261 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 CRYBA4P53673 196 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 ZNF493Q6ZR52 646 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 TEN1Q86WV5 123 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
ITGB4-202ENST00000449880 DAZ1Q9NQZ3 744 aaKnown RBP11.09□□□□□ -0.63
ITGB4-202ENST00000449880 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
ITGB4-202ENST00000449880 NDPQ00604 133 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 SP5Q6BEB4 398 aaPredicted RBP11.08□□□□□ -0.64
ITGB4-202ENST00000449880 Q6ZVH6 145 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 C6orf226Q5I0X4 101 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 COL8A2P25067 703 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 RBAKDNA6NC62 111 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 F8WEM9 126 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 C17orf58Q2M2W7 97 aa11.08□□□□□ -0.64
ITGB4-202ENST00000449880 SAA4P35542 130 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 RSPO1Q2MKA7 263 aaPredicted RBP11.07□□□□□ -0.64
ITGB4-202ENST00000449880 TCTEX1D4Q5JR98 221 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 AMTNQ6UX39 209 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 MRPL53Q96EL3 112 aaKnown RBP11.07□□□□□ -0.64
ITGB4-202ENST00000449880 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 MSMBP08118 114 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
ITGB4-202ENST00000449880 C8orf31Q8N9H6 132 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 TMEM258P61165 79 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 ABCA4P78363 2273 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 J3KT08 172 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 RHOHQ15669 191 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
ITGB4-202ENST00000449880 K7ENP7 123 aa11.06□□□□□ -0.64
ITGB4-202ENST00000449880 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
ITGB4-202ENST00000449880 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
ITGB4-202ENST00000449880 RIF1Q5UIP0 2472 aaKnown RBP11.06□□□□□ -0.64
ITGB4-202ENST00000449880 PHF3Q92576 2039 aaKnown RBP11.06□□□□□ -0.64
ITGB4-202ENST00000449880 C1orf159Q96HA4 380 aa11.06□□□□□ -0.64
ITGB4-202ENST00000449880 ZNF503-AS2A6NEH8 195 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 DKK1O94907 266 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 SS18Q15532 418 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 POLEQ07864 2286 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 E7EQL1 145 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 KIAA1549LQ6ZVL6 1849 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 A0A087WWL8 130 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 UBE2E1P51965 193 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 MPDZO75970 2070 aa11.05□□□□□ -0.64
ITGB4-202ENST00000449880 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 OVOL3O00110 214 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 ATOX1O00244 68 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
ITGB4-202ENST00000449880 MORN5Q5VZ52 161 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 WDR86Q86TI4 376 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 FOXI1Q12951 378 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 LYPD2Q6UXB3 125 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 WT1-ASQ06250 92 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 TEX36Q5VZQ5 186 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 IGFL4Q6B9Z1 124 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 C11orf1Q9H5F2 150 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
ITGB4-202ENST00000449880 CACNA1BQ00975 2339 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 ATP5G1P05496 136 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 KRTAP27-1Q3LI81 207 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 TRBV6-1A0A0K0K1D8 114 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 DEFB131AP59861 70 aa11.03□□□□□ -0.64
ITGB4-202ENST00000449880 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.64
ITGB4-202ENST00000449880 HERVK_113P63121 156 aa11.02□□□□□ -0.64
ITGB4-202ENST00000449880 SMIM20Q8N5G0 67 aa11.02□□□□□ -0.64
ITGB4-202ENST00000449880 LY6HO94772 140 aa11.02□□□□□ -0.65
ITGB4-202ENST00000449880 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms