RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 SSC4DQ8WTU2 575 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 PYGO2Q9BRQ0 406 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 TRGV3P03979 118 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 PROK2Q9HC23 129 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 NDUFS7O75251 213 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 ZNF497Q6ZNH5 498 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 FDCSPQ8NFU4 85 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 TP53TG1Q9Y2A0 90 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 ZGRF1Q86YA3 2104 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 TRGV11A0A075B6L2 103 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 NUPR1O60356 82 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 CRLF1O75462 422 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 PRB1P04280 392 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 HAX1O00165 279 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 CLEC19AQ6UXS0 136 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
SMC6-207ENST00000448223 J3QQQ9 107 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 HERVK_113P63121 156 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 CRIP3Q6Q6R5 217 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 CEP295Q9C0D2 2601 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 COL6A3P12111 3177 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 PRSS46E5RG02 174 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 OVOL1O14753 267 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 FXYD2P54710 66 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 LYPD1Q8N2G4 141 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 COLQQ9Y215 455 aaPredicted RBP7.44□□□□□ -1.22
SMC6-207ENST00000448223 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
SMC6-207ENST00000448223 LRP4O75096 1905 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 C16orf97H3BN30 126 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 CRYGBP07316 175 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
SMC6-207ENST00000448223 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 C1orf159Q96HA4 380 aa7.44□□□□□ -1.22
SMC6-207ENST00000448223 C15orf62A8K5M9 175 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 Q8TAT8 98 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 hADV29S1A0JD25 119 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 IGLV3-1P01715 115 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 ETV2O00321 342 aaPredicted RBP7.43□□□□□ -1.22
SMC6-207ENST00000448223 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 A0A087WX48 190 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 TRGV9Q99603 122 aa7.43□□□□□ -1.22
SMC6-207ENST00000448223 ADAMTS9Q9P2N4 1935 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 PSPNO60542 156 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 ZNF493Q6ZR52 646 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 DSPP15924 2871 aaKnown RBP7.42□□□□□ -1.22
SMC6-207ENST00000448223 NDUFC2-KCTD14E9PQ53 114 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 C1orf210Q8IVY1 113 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 DEFB123Q8N688 67 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 CUL9Q8IWT3 2517 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 FAM236DA0A1B0GTK5 79 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 FAM236CP0DP71 79 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 ASPHD1Q5U4P2 390 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 Q6ZPA2 131 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 CPAMD8Q8IZJ3 1885 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 TNRC6AQ8NDV7 1962 aaKnown RBP7.42□□□□□ -1.22
SMC6-207ENST00000448223 TIMM23O14925 209 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 PAX9P55771 341 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 ERCC8Q13216 396 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 DPM3Q9P2X0 92 aa7.42□□□□□ -1.22
SMC6-207ENST00000448223 M0R1W7 72 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 DUSP14O95147 198 aaKnown RBP7.41□□□□□ -1.22
SMC6-207ENST00000448223 B3GALT5-AS1P59052 145 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 PSG7Q13046 419 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 LINC00643Q86TS7 51 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 ITLN2Q8WWU7 325 aaPredicted RBP7.41□□□□□ -1.22
SMC6-207ENST00000448223 CLPSL1A2RUU4 121 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 H0YJW9 148 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 HIGD1BQ9P298 99 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 METRNQ9UJH8 293 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 LY6G6EA0A0G2JKS1 128 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 IGKV1D-33P01593 117 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 IGKV1-33P01594 117 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 WFDC11Q8NEX6 87 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
SMC6-207ENST00000448223 U3KQA8 63 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 ATRXP46100 2492 aa7.41□□□□□ -1.22
SMC6-207ENST00000448223 TLN1Q9Y490 2541 aaKnown RBP7.41□□□□□ -1.22
SMC6-207ENST00000448223 TRAV12-2A0A075B6T6 113 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
SMC6-207ENST00000448223 FOXF2Q12947 444 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 TMEM167AQ8TBQ9 72 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 SMIM9A6NGZ8 99 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 NTN3O00634 580 aaPredicted RBP7.4□□□□□ -1.22
SMC6-207ENST00000448223 MYOD1P15172 320 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 CXCL5P42830 114 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 FOXL2NBQ6ZUU3 175 aa7.4□□□□□ -1.22
SMC6-207ENST00000448223 CENPVQ7Z7K6 275 aaPredicted RBP7.4□□□□□ -1.22
SMC6-207ENST00000448223 IGKV1-39P01597 117 aa7.4□□□□□ -1.23
SMC6-207ENST00000448223 IGKV1D-39P04432 117 aa7.4□□□□□ -1.23
SMC6-207ENST00000448223 WIPF2Q8TF74 440 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms