RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 NUDT3O95989 172 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
OTUB1-204ENST00000447683 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 DPF1Q92782 380 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
OTUB1-204ENST00000447683 PSMG3-AS1Q96PY0 264 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 TPPP3Q9BW30 176 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 TMSB15BA0A087X1C1 80 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 H3BUA1 57 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 K7EP34 96 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 IGLL1P15814 213 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 LY6EQ16553 131 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
OTUB1-204ENST00000447683 IGHV3OR16-13A0A075B7E8 117 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 IGHV3-74A0A0B4J1X5 117 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 B4DSR2 109 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
OTUB1-204ENST00000447683 IGLC6P0CF74 106 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 DSCR9P59020 149 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
OTUB1-204ENST00000447683 ERCC8Q13216 396 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 AP1S3Q96PC3 154 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 SPG11Q96JI7 2443 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 SLC25A34Q6PIV7 304 aa12.49□□□□□ -0.41
OTUB1-204ENST00000447683 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 ARL3P36405 182 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 HIF1ANQ9NWT6 349 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
OTUB1-204ENST00000447683 SVEP1Q4LDE5 3571 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 IGHV3-49A0A0A0MS15 119 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 TMEM213A2RRL7 107 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 CRXO43186 299 aaPredicted RBP12.48□□□□□ -0.41
OTUB1-204ENST00000447683 OR5AL1P0C617 328 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 C8orf86Q6ZUL3 223 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 USMG5Q96IX5 58 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 U3KQK5 164 aa12.48□□□□□ -0.41
OTUB1-204ENST00000447683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■□□□□ 9.9
OTUB1-204ENST00000447683 MUC21A0A0G2JKD1 596 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 MUC21A0A140T8X8 626 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 AVPP01185 164 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 SMAGPQ0VAQ4 97 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 MUC21Q5SSG8 566 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 FAM104BQ5XKR9 115 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 GLMPQ8WWB7 406 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 FAM110AQ9BQ89 295 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 TMEM70Q9BUB7 260 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 ACACBO00763 2458 aa12.47□□□□□ -0.41
OTUB1-204ENST00000447683 H3BRM9 83 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 GATA3P23771 443 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 ZNF138P52744 262 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 C7orf71A4D174 169 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 C9orf118A6NHY6 69 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 NDUFA4O00483 81 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 LINC01559Q495D7 138 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 NPFFR1Q9GZQ6 430 aa12.46□□□□□ -0.41
OTUB1-204ENST00000447683 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 BLCAPP62952 87 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 IL17RELQ6ZVW7 336 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 SPATA12Q7Z6I5 190 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 NRGNQ92686 78 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 CNFNQ9BYD5 112 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 SLC25A16P16260 332 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 LINC00173Q6ZV60 143 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 FA2HQ7L5A8 372 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 GTSF1LQ9H1H1 148 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
OTUB1-204ENST00000447683 COL12A1Q99715 3063 aa12.45□□□□□ -0.42
OTUB1-204ENST00000447683 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 A6NDN8 102 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 ORM1P02763 201 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 CSN3P07498 182 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 AMN1Q8IY45 258 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 ATOH7Q8N100 152 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 SYS1-DBNDD2H3BUS1 97 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 Q6ZS46 218 aa12.44□□□□□ -0.42
OTUB1-204ENST00000447683 IGLV1-40P01703 118 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 AP5S1Q9NUS5 200 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 D6R8Y8 96 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 SMAD7O15105 426 aaKnown RBP12.43□□□□□ -0.42
OTUB1-204ENST00000447683 MRPL51Q4U2R6 128 aaKnown RBP12.43□□□□□ -0.42
OTUB1-204ENST00000447683 TMEM78Q5T7P6 136 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 ORMDL3Q8N138 153 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 ZNF580Q9UK33 172 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 FLNCQ14315 2725 aa12.43□□□□□ -0.42
OTUB1-204ENST00000447683 A0A096LNT2 108 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms