RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 J3QQQ9 107 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 LEPROTO15243 131 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 COLQQ9Y215 455 aaPredicted RBP6.29□□□□□ -1.4
SMG1-202ENST00000446231 UBE2L6O14933 153 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 PLA2G5P39877 138 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 ZNF295-AS1Q8N0V1 137 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 CD7P09564 240 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 HIST1H4AP62805 103 aaKnown RBP6.29□□□□□ -1.4
SMG1-202ENST00000446231 TM2D2Q9BX73 214 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 ERCC8Q13216 396 aa6.29□□□□□ -1.4
SMG1-202ENST00000446231 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 DTX2Q86UW9 622 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 C3orf56Q8N813 242 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 NPC2P61916 151 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 PTH2Q96A98 100 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 WT1-ASQ06250 92 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 C20orf78Q9BR46 151 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 DPH3P1Q9H4G8 78 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 A0A087WWL8 130 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 IGHV1-46P01743 117 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 ATP1A1-AS1Q5TC04 95 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 PRSS22Q9GZN4 317 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 IGKV3OR2-268A0A0C4DH90 116 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
SMG1-202ENST00000446231 DUSP14O95147 198 aaKnown RBP6.28□□□□□ -1.4
SMG1-202ENST00000446231 OBSL1O75147 1896 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 SPRR3Q9UBC9 169 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 C17orf82Q86X59 251 aaPredicted RBP6.28□□□□□ -1.4
SMG1-202ENST00000446231 ARRDC1-AS1Q9H2J1 176 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 ZNF493Q6ZR52 646 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 MBD6Q96DN6 1003 aa6.28□□□□□ -1.4
SMG1-202ENST00000446231 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.4
SMG1-202ENST00000446231 UTF1Q5T230 341 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 IGKV3-15P01624 115 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 LINC00158P58513 81 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 A0A0U1RRA0 63 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 ODF1Q14990 250 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 DEFB104AQ8WTQ1 72 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 EFNA4P52798 201 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 COL11A2P13942 1736 aaPredicted RBP6.27□□□□□ -1.41
SMG1-202ENST00000446231 WDR86Q86TI4 376 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 IGKV3-20P01619 116 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 U3KQK5 164 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 C17orf100A8MU93 164 aa6.27□□□□□ -1.41
SMG1-202ENST00000446231 FGF23Q9GZV9 251 aaPredicted RBP6.27□□□□□ -1.41
SMG1-202ENST00000446231 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 GATA1P15976 413 aaPredicted RBP6.26□□□□□ -1.41
SMG1-202ENST00000446231 NDUFA12Q9UI09 145 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 DTX1Q86Y01 620 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 GATA4P43694 442 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 TRPT1Q86TN4 253 aaKnown RBP6.26□□□□□ -1.41
SMG1-202ENST00000446231 LINC01587Q99440 93 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
SMG1-202ENST00000446231 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 PF4V1P10720 104 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 PRR25Q96S07 402 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 Q6ZSR3 168 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
SMG1-202ENST00000446231 ZNRD1Q9P1U0 126 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 FOXC1Q12948 553 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 PLXNA2O75051 1894 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 B9A039 149 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 Q8N1Y9 231 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 Q0VFX4 171 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 ZNF833PQ6ZTB9 187 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 ZNF503Q96F45 646 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 GP9P14770 177 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 PATE2Q6UY27 113 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 SRD5A1P18405 259 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 SYNJ2BPP57105 145 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 C3orf36Q3SXR2 165 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 LOXL1Q08397 574 aaPredicted RBP6.25□□□□□ -1.41
SMG1-202ENST00000446231 SPXQ9BT56 116 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 TIMM23O14925 209 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 TRIP6Q15654 476 aaKnown RBP6.25□□□□□ -1.41
SMG1-202ENST00000446231 PIFOQ8TCI5 191 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 C11orf53Q8IXP5 236 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 DYNLRB2Q8TF09 96 aa6.25□□□□□ -1.41
SMG1-202ENST00000446231 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 BSPH1Q075Z2 132 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 IGHV1-8P0DP01 117 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 C17orf58Q2M2W7 97 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 Q8TCH9 128 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 LINC00477Q96M19 166 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 PROK2Q9HC23 129 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 K7EM74 188 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 TP53TG1Q9Y2A0 90 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 CRIP3Q6Q6R5 217 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 LTBP1Q14766 1721 aa6.24□□□□□ -1.41
SMG1-202ENST00000446231 NDUFA7O95182 113 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms