RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
SLC38A1-202ENST00000439706 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
SLC38A1-202ENST00000439706 FOXI2Q6ZQN5 318 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 ATP6V0BQ99437 205 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 LINC01548A6NM66 108 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 RNASE6Q93091 150 aaKnown RBP9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 CHTOPQ9Y3Y2 248 aaKnown RBP9.67□□□□□ -0.86
SLC38A1-202ENST00000439706 A0A1B0GW15 77 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 NDUFS8O00217 210 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 NCOR1P1Q9H4R4 102 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 CFHR4Q92496 578 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 NDPQ00604 133 aa9.66□□□□□ -0.86
SLC38A1-202ENST00000439706 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 FABP5P3A8MUU1 101 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 SIVA1O15304 175 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 BMI1P35226 326 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
SLC38A1-202ENST00000439706 LINC01549A6NIU2 74 aa9.65□□□□□ -0.87
SLC38A1-202ENST00000439706 MGPP08493 103 aa9.65□□□□□ -0.87
SLC38A1-202ENST00000439706 MFAP4P55083 255 aa9.65□□□□□ -0.87
SLC38A1-202ENST00000439706 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.87
SLC38A1-202ENST00000439706 COLQQ9Y215 455 aaPredicted RBP9.65□□□□□ -0.87
SLC38A1-202ENST00000439706 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 CUL9Q8IWT3 2517 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 PRSS47A8MTI9 375 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 RPL11P62913 178 aaKnown RBP9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 LINC01560Q8TB33 94 aa9.64□□□□□ -0.87
SLC38A1-202ENST00000439706 A0A0G2JNJ9 132 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 GEMIN7Q9H840 131 aaKnown RBP9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 Q9UFV3 132 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 RPL7P18124 248 aaKnown RBP9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 CRYBA4P53673 196 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 PHLDA1Q8WV24 401 aaPredicted RBP9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
SLC38A1-202ENST00000439706 E9PLD3 99 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 F8W1H4 67 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 MT-ATP8P03928 68 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 IGF1P05019 195 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 HOXB4P17483 251 aaPredicted RBP9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 DLX6P56179 175 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 TMEM30BQ3MIR4 351 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 DPF1Q92782 380 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 SCGB3A1Q96QR1 104 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 U3KQK5 164 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 E7EQL1 145 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 NBR2O15453 112 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 IGLV1-47P01700 117 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 CLEC3BP05452 202 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 PAX8Q06710 450 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 DEFB123Q8N688 67 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 VSTM5A8MXK1 200 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 THBDP07204 575 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 CRYGBP07316 175 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 LAGE3Q14657 143 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 PVRIGQ6DKI7 326 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 SMAD5-AS1Q9Y6J3 95 aa9.62□□□□□ -0.87
SLC38A1-202ENST00000439706 NCOR2Q9Y618 2525 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 LINC00311Q8N616 119 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 ZNF815PA8K554 130 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
SLC38A1-202ENST00000439706 SLC25A16P16260 332 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 GATA3P23771 443 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 ZNF292O60281 2723 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 CLEC19AQ6UXS0 136 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 KIR2DL4Q99706 377 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 BSNQ9UPA5 3926 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
SLC38A1-202ENST00000439706 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
SLC38A1-202ENST00000439706 PLEKHB2Q96CS7 222 aa9.59□□□□□ -0.87
SLC38A1-202ENST00000439706 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
SLC38A1-202ENST00000439706 BEX4Q9NWD9 120 aaPredicted RBP9.59□□□□□ -0.87
SLC38A1-202ENST00000439706 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms