RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 ORM1P02763 201 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 SLURP1P55000 103 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 HILS1P60008 231 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 OR10J3Q5JRS4 329 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 TMEM256Q8N2U0 113 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
LINC00163-202ENST00000439088 M0QZ24 198 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 KHDC1LQ5JSQ8 128 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 OR10D4PQ8NGN7 298 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 BORCS7Q96B45 105 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
LINC00163-202ENST00000439088 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 ACANP16112 2415 aa11.31□□□□□ -0.6
LINC00163-202ENST00000439088 AMBPP02760 352 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 SRIP30626 198 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
LINC00163-202ENST00000439088 K7EQG2 157 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 NUPR1O60356 82 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 ESDP10768 282 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
LINC00163-202ENST00000439088 PEMTQ9UBM1 199 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 DEFB1P60022 68 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 FER1L6-AS1Q8NA97 138 aa11.29□□□□□ -0.6
LINC00163-202ENST00000439088 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
LINC00163-202ENST00000439088 F6UB75 175 aa11.28□□□□□ -0.6
LINC00163-202ENST00000439088 CTRLP40313 264 aa11.28□□□□□ -0.6
LINC00163-202ENST00000439088 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
LINC00163-202ENST00000439088 OR9G4Q8NGQ1 327 aa11.28□□□□□ -0.6
LINC00163-202ENST00000439088 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
LINC00163-202ENST00000439088 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.6
LINC00163-202ENST00000439088 SERF1AO75920 110 aa11.27□□□□□ -0.6
LINC00163-202ENST00000439088 TFPI2P48307 235 aa11.27□□□□□ -0.6
LINC00163-202ENST00000439088 LINC00310P59036 64 aa11.27□□□□□ -0.6
LINC00163-202ENST00000439088 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.6
LINC00163-202ENST00000439088 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
LINC00163-202ENST00000439088 MYO9AB2RTY4 2548 aa11.27□□□□□ -0.61
LINC00163-202ENST00000439088 PAFAH1B2P68402 229 aa11.27□□□□□ -0.61
LINC00163-202ENST00000439088 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
LINC00163-202ENST00000439088 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
LINC00163-202ENST00000439088 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
LINC00163-202ENST00000439088 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
LINC00163-202ENST00000439088 F2Z2F3 143 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 CD28P10747 220 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 PRR9Q5T870 116 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
LINC00163-202ENST00000439088 ZMAT5Q9UDW3 170 aaKnown RBP11.26□□□□□ -0.61
LINC00163-202ENST00000439088 NDUFA7O95182 113 aa11.26□□□□□ -0.61
LINC00163-202ENST00000439088 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 GPX1P07203 203 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 ZNF688P0C7X2 276 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 PYY3Q5JQD4 70 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 PSMG4Q5JS54 123 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
LINC00163-202ENST00000439088 CSN3P07498 182 aa11.24□□□□□ -0.61
LINC00163-202ENST00000439088 RAX2Q96IS3 184 aa11.24□□□□□ -0.61
LINC00163-202ENST00000439088 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
LINC00163-202ENST00000439088 ANK3Q12955 4377 aaKnown RBP11.24□□□□□ -0.61
LINC00163-202ENST00000439088 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
LINC00163-202ENST00000439088 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
LINC00163-202ENST00000439088 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
LINC00163-202ENST00000439088 CITED2Q99967 270 aaPredicted RBP11.24□□□□□ -0.61
LINC00163-202ENST00000439088 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 FOSL1P15407 271 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 NTF3P20783 257 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 FHL3Q13643 280 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 TWIST1Q15672 202 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 Q6ZQT7 251 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 RCHY1Q96PM5 261 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 A0A0J9YX75 114 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 CCL24O00175 119 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
LINC00163-202ENST00000439088 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
LINC00163-202ENST00000439088 FLNBO75369 2602 aaKnown RBP11.22□□□□□ -0.61
LINC00163-202ENST00000439088 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
LINC00163-202ENST00000439088 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
LINC00163-202ENST00000439088 KLLNB2CW77 178 aa11.22□□□□□ -0.61
LINC00163-202ENST00000439088 J3KRW8 73 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms