RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 CRISP2P16562 243 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 EBLN2Q6P2I7 272 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 ZFAND2AQ8N6M9 145 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 OR2K2Q8NGT1 345 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 SAV1Q9H4B6 383 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 ZNF256Q9Y2P7 627 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 LCE2BO14633 110 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 CD33P20138 364 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 DEFB131AP59861 70 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 RPL19P84098 196 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 PRR9Q5T870 116 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 NEU1Q99519 415 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 GFRA4Q9GZZ7 299 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 MAP6D1Q9H9H5 199 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 NAT8BQ9UHF3 227 aa10.11□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TMEM189A5PLL7 270 aa10.1□□□□□ -0.79
HLA-DPA1-243ENST00000437811 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
HLA-DPA1-243ENST00000437811 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
HLA-DPA1-243ENST00000437811 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
HLA-DPA1-243ENST00000437811 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 GZMBP10144 247 aa10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 LEPP41159 167 aa10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 SMCPP49901 116 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
HLA-DPA1-243ENST00000437811 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 A8MTW9 85 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 KLLNB2CW77 178 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 GPX1P07203 203 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 HLA-DRB4P13762 266 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ODF3L2Q3SX64 289 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 HLA-DRB4X5D2U9 266 aa10.08□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TRAV21A0A0B4J279 112 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 J3KRW8 73 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 Q6AWC8 147 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 AMTNQ6UX39 209 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 C11orf21Q9P2W6 132 aa10.07□□□□□ -0.8
HLA-DPA1-243ENST00000437811 H3BMM0 161 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 SPINK4O60575 86 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ORM1P02763 201 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RAB5BP61020 215 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 COX19Q49B96 90 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ACTL10Q5JWF8 245 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 MRPL54Q6P161 138 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 PGLYRP4Q96LB8 373 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
HLA-DPA1-243ENST00000437811 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TRGC2P03986 189 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 FRMD6-AS1P0C7T7 363 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TSPOP30536 169 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ZNF124Q15973 351 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 Q6ZQT7 251 aa10.05□□□□□ -0.8
HLA-DPA1-243ENST00000437811 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 C7orf71A4D174 169 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 PHOX2AO14813 284 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 IGLC6P0CF74 106 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 INSL3P51460 131 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 WDR73Q6P4I2 378 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-243ENST00000437811 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 CTRLP40313 264 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 CDKN1BP46527 198 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 SPINK13Q1W4C9 94 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 GFI1BQ5VTD9 330 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 CLUHP3Q96NS8 147 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 FAM110AQ9BQ89 295 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 TRAPPC1Q9Y5R8 145 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 WNK1Q9H4A3 2382 aa10.03□□□□□ -0.8
HLA-DPA1-243ENST00000437811 A0A1B0GUT8 65 aa10.02□□□□□ -0.8
HLA-DPA1-243ENST00000437811 M0R2Z0 102 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms