RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 NUDT15Q9NV35 164 aa7.42□□□□□ -1.22
SPTLC1P4-201ENST00000435997 PTTG2Q9NZH5 202 aa7.42□□□□□ -1.22
SPTLC1P4-201ENST00000435997 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
SPTLC1P4-201ENST00000435997 TIMM9Q9Y5J7 89 aa7.42□□□□□ -1.22
SPTLC1P4-201ENST00000435997 TRAV6A0A075B6T7 132 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 K7EQD1 137 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 EREGO14944 169 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 S100A10P60903 97 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 ZNF415Q09FC8 603 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 ZNF266Q14584 549 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 ATP6V1FQ16864 119 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 TMEM78Q5T7P6 136 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 NEGR1Q7Z3B1 354 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 IQCF2Q8IXL9 164 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 Q8TAT8 98 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 BLNKQ8WV28 456 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 FXYD5Q96DB9 178 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
SPTLC1P4-201ENST00000435997 RBAKDNA6NC62 111 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 PRAF2O60831 178 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 INAFM2P0DMQ5 153 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 ZNF138P52744 262 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 Q6AWC8 147 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 FAM122CQ6P4D5 195 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 WFDC10BQ8IUB3 73 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 OR10G4Q8NGN3 311 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 RASL10AQ92737 203 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 PHYHIPLQ96FC7 376 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 ARPC5LQ9BPX5 153 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 LY96Q9Y6Y9 160 aa7.4□□□□□ -1.22
SPTLC1P4-201ENST00000435997 SRIP30626 198 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 GPN1Q9HCN4 374 aaPredicted RBP7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 MDFICQ9P1T7 246 aa7.39□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 OR10J4P0C629 311 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 SFTA3P0C7M3 94 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TDRG1Q3Y452 100 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 OR5C1Q8NGR4 320 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 FRZBQ92765 325 aa7.38□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 E5RGE8 158 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 ORM1P02763 201 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 GYPEP15421 78 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 NHLH2Q02577 135 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 MUC21Q5SSG8 566 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 PAXXQ9BUH6 204 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 CCDC32Q9BV29 185 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 KCNIP2Q9NS61 270 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 LENEPQ9Y5L5 61 aa7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TRAV4A0A0B4J268 109 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 C9JCJ5 164 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 CRYGDP07320 174 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 EVI2AP22794 236 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TIRAPP58753 221 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 PCNPQ8WW12 178 aaKnown RBP7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TMED6Q8WW62 240 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 SPXQ9BT56 116 aa7.36□□□□□ -1.23
SPTLC1P4-201ENST00000435997 DIRC3C9JPN6 131 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 H0YIZ8 118 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 IFNA5P01569 189 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 GCSHP23434 173 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TMEM183BQ1AE95 376 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TMEM183AQ8IXX5 376 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TXNDC17Q9BRA2 123 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 NMES1Q9C002 83 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
SPTLC1P4-201ENST00000435997 IGHV3-16A0A0C4DH30 117 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 OR7C2O60412 319 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 CSN1S1P47710 185 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 RANP62826 216 aaKnown RBP7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 LINC01556Q5JQF7 62 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 SLC25A31Q9H0C2 315 aa7.34□□□□□ -1.23
SPTLC1P4-201ENST00000435997 IGHV3-38A0A0C4DH36 116 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 FAM240BA0A1B0GVZ2 78 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 M0R2P5 195 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 FAM159AQ6UWV7 190 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
SPTLC1P4-201ENST00000435997 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms