RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 S100PP25815 95 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 LEPP41159 167 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 KCNIP4Q6PIL6 250 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
HMGB3P4-201ENST00000428776 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 A8MTW9 85 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 H3BMM0 161 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 WIPF1O43516 503 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 SH2D1AO60880 128 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 GPX1P07203 203 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 PFN1P07737 140 aaKnown RBP9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 TSPOP30536 169 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 CT83Q5H943 113 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 ACTL10Q5JWF8 245 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
HMGB3P4-201ENST00000428776 A8MWL6 223 aa9.42□□□□□ -0.9
HMGB3P4-201ENST00000428776 ELOBQ15370 118 aa9.42□□□□□ -0.9
HMGB3P4-201ENST00000428776 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
HMGB3P4-201ENST00000428776 URGCP-MRPS24S4R325 110 aa9.42□□□□□ -0.9
HMGB3P4-201ENST00000428776 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 TRAV9-1A0A075B6T8 112 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 SMIM27A0A1W2PRY6 76 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 COLCA2A8K830 154 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 KLLNB2CW77 178 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 ZNF124Q15973 351 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 TSKUQ8WUA8 353 aa9.41□□□□□ -0.9
HMGB3P4-201ENST00000428776 TRAV21A0A0B4J279 112 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 XKRY2A2RUG3 117 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 CD7P09564 240 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 IGLL1P15814 213 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 CDKN1BP46527 198 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 FAM3BP58499 235 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 PRR9Q5T870 116 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 Q6AWC8 147 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 BTF3L4Q96K17 158 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.9
HMGB3P4-201ENST00000428776 TRBV24-1A0A075B6N3 115 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 J3KRW8 73 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 ORM1P02763 201 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 PRR31Q5SQ13 230 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 GTSCR1Q86UQ5 136 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 STHQ8IWL8 128 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
HMGB3P4-201ENST00000428776 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 A0A1W2PPQ1 181 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 C7orf71A4D174 169 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 M0R2Z0 102 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
HMGB3P4-201ENST00000428776 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 AMBPP02760 352 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 CXCL1P09341 107 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 TCL1AP56279 114 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 NEU1Q99519 415 aa9.37□□□□□ -0.91
HMGB3P4-201ENST00000428776 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 HIGD1CA8MV81 97 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 GZMBP10144 247 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 RAB5AP20339 215 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 Q6ZQT7 251 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 NUP35Q8NFH5 326 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
HMGB3P4-201ENST00000428776 TRAV12-2A0A075B6T6 113 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 TYMSP04818 313 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 KCNS1Q96KK3 526 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 MDFIQ99750 246 aa9.35□□□□□ -0.91
HMGB3P4-201ENST00000428776 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms