RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SSX7Q7RTT5 188 aa13.43□□□□□ -0.26
COL9A2-204ENST00000427563 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 HMGB3O15347 200 aaKnown RBP13.42□□□□□ -0.26
COL9A2-204ENST00000427563 ATP5G1P05496 136 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 STAG3L2P0CL84 134 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 STAG3L3P0CL85 134 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
COL9A2-204ENST00000427563 ATP5G3P48201 142 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 CCDC28AQ8IWP9 274 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
COL9A2-204ENST00000427563 FHITP49789 147 aa13.41□□□□□ -0.26
COL9A2-204ENST00000427563 TMEM78Q5T7P6 136 aa13.41□□□□□ -0.26
COL9A2-204ENST00000427563 LYPD1Q8N2G4 141 aa13.41□□□□□ -0.26
COL9A2-204ENST00000427563 TP53TG3Q9ULZ0 132 aa13.41□□□□□ -0.26
COL9A2-204ENST00000427563 GAGE12BA1L429 117 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 M0R2N4 97 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 GAGE7O76087 117 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 NMBP08949 121 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 GAGE12FP0CL80 117 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 ARL14EPLP0DKL9 152 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 ZNF138P52744 262 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 Q6ZTI0 123 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 C15orf53Q8NAA6 179 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 GSN-AS1Q9NRJ2 163 aa13.4□□□□□ -0.26
COL9A2-204ENST00000427563 RBAKDNA6NC62 111 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 GPX1P07203 203 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 HOXA5P20719 270 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 SULT1A2P50226 295 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
COL9A2-204ENST00000427563 RNF212Q495C1 297 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 DPPA3Q6W0C5 159 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 HERC2O95714 4834 aa13.39□□□□□ -0.27
COL9A2-204ENST00000427563 IGLV2-18A0A075B6J9 118 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 SNURFLB1AK76 121 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 RAB5CP51148 216 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 ANXA2RQ3ZCQ2 193 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 Q6ZR54 194 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 UBE2DNLQ8IWF7 75 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 KLF12Q9Y4X4 402 aa13.38□□□□□ -0.27
COL9A2-204ENST00000427563 TRBV7-9A0A0J9YWB2 115 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 MAP1LC3B2A6NCE7 125 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 RTL8CO15255 209 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 CXorf1O96002 111 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 GCHFRP30047 84 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 FAM74A1Q5RGS3 127 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 ALKAL2Q6UX46 152 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 EIF4E3Q8N5X7 224 aaKnown RBP13.37□□□□□ -0.27
COL9A2-204ENST00000427563 MAP1LC3BQ9GZQ8 125 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 TMPRSS5Q9H3S3 457 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
COL9A2-204ENST00000427563 PKD1P98161 4303 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 PGPA6NDG6 321 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 NUDT3O95989 172 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 CSN1S1P47710 185 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 LGALS9BQ3B8N2 356 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 PKHD1P08F94 4074 aa13.36□□□□□ -0.27
COL9A2-204ENST00000427563 MUC4Q99102 2169 aa13.35□□□□□ -0.27
COL9A2-204ENST00000427563 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-204ENST00000427563 TCL1AP56279 114 aa13.35□□□□□ -0.27
COL9A2-204ENST00000427563 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
COL9A2-204ENST00000427563 SUN5Q8TC36 379 aa13.35□□□□□ -0.27
COL9A2-204ENST00000427563 TVP23CQ96ET8 276 aa13.35□□□□□ -0.27
COL9A2-204ENST00000427563 IGHV1OR15-1A0A075B7D0 117 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 TRAV26-1A0A087WT03 109 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 SPINK4O60575 86 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 GNG5P63218 68 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 TMEM167BQ9NRX6 74 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
COL9A2-204ENST00000427563 A0A0J9YY99 117 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 A0A1B0GVY2 172 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 RGS13O14921 159 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 OR5I1Q13606 314 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 IBA57Q5T440 356 aaKnown RBP13.33□□□□□ -0.28
COL9A2-204ENST00000427563 Q6AWC8 147 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 GOLT1AQ6ZVE7 132 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 ZNRF2Q8NHG8 242 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 SFT2D1Q8WV19 159 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 C18orf15Q96N68 181 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 LINC00588Q9Y4M8 146 aa13.33□□□□□ -0.28
COL9A2-204ENST00000427563 DYNC1H1Q14204 4646 aaKnown RBP13.32□□□□□ -0.28
COL9A2-204ENST00000427563 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
COL9A2-204ENST00000427563 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
COL9A2-204ENST00000427563 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
COL9A2-204ENST00000427563 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
COL9A2-204ENST00000427563 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
COL9A2-204ENST00000427563 TEX261Q6UWH6 196 aa13.31□□□□□ -0.28
COL9A2-204ENST00000427563 MRPL16Q9NX20 251 aaKnown RBP13.31□□□□□ -0.28
COL9A2-204ENST00000427563 MDFICQ9P1T7 246 aa13.31□□□□□ -0.28
COL9A2-204ENST00000427563 TRAV1-1A0A0B4J248 108 aa13.3□□□□□ -0.28
COL9A2-204ENST00000427563 A0A1B0GV50 99 aa13.3□□□□□ -0.28
COL9A2-204ENST00000427563 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms