RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OR2H2O95918 312 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 MT-ND4LP03901 98 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 S100A8P05109 93 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CRYBA1P05813 215 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SRP19P09132 144 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SFTA3P0C7M3 94 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 GZMHP20718 246 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 NFYBP25208 207 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 ATP6V0CP27449 155 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SULT1A1P50225 295 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 DYNLT3P51808 116 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 AKR1C2P52895 323 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 MP68P56378 58 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 FXYD4P59646 89 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 S100A10P60903 97 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 RAB5BP61020 215 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 S100A12P80511 92 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 PLGLB1Q02325 96 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 AKR1C1Q04828 323 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 RAB31Q13636 194 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 RHEBQ15382 184 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 MMDQ15546 238 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TBC1D28Q2M2D7 210 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 LRRC75BQ2VPJ9 315 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM249Q2WGJ8 235 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR10J3Q5JRS4 329 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 HES3Q5TGS1 186 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR2T2Q6IF00 324 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 HAGHLQ6PII5 290 aaPredicted RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM14EPQ6UXP3 125 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SSX7Q7RTT5 188 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 FAM19A3Q7Z5A8 133 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SLC35E3Q7Z769 313 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 MRPL52Q86TS9 123 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 IQCF2Q8IXL9 164 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 C17orf78Q8N4C9 275 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 DEFB123Q8N688 67 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF565Q8N9K5 539 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 Q8NAQ8 132 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR5C1Q8NGR4 320 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR13D1Q8NGV5 346 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR10J5Q8NHC4 309 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CLDND2Q8NHS1 167 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SLC25A40Q8TBP6 338 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 GALMQ96C23 342 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CIB3Q96Q77 187 aaPredicted RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 YPEL2Q96QA6 119 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TXNDC17Q9BRA2 123 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 PBDC1Q9BVG4 233 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 RTL8AQ9BWD3 113 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 OR2J1Q9GZK6 312 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TREM1Q9NP99 234 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 ASCL3Q9NQ33 180 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 BIN3Q9NQY0 253 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SMCO4Q9NRQ5 59 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 C19orf12Q9NSK7 152 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 METTL1Q9UBP6 276 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 RPUSD1Q9UJJ7 312 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 PRELID1Q9Y255 219 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 URB1O60287 2271 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 BSNQ9UPA5 3926 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 MALRD1Q5VYJ5 2156 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CNOT1A5YKK6 2376 aaKnown RBP1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 PCNX1Q96RV3 2341 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 LOC400499M0QZD8 3231 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CTXND1A0A1B0GTU2 59 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 A0A1W2PNM2 257 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM30CPA0ZSE6 113 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ODAMA1E959 279 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 C1orf196B1AJZ1 125 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 FNDC10F2Z333 226 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM250H0YL14 139 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 H3BQ15 152 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF73O43830 326 aaPredicted RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SSSCA1O60232 199 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF737O75373 536 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CST7O76096 145 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 HAND1O96004 215 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 IFNA5P01569 189 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 IGKV1-5P01602 117 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 PRH1P02810 166 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 SMIM6P0DI80 62 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CD99P14209 185 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 GLRXP35754 106 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 PPP1CCP36873 323 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 PSMB3P49720 205 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 IDH3GP51553 393 aaPredicted RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 B2MP61769 119 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 POLR2GP62487 172 aaKnown RBP eCLIP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 RPL30P62888 115 aaKnown RBP1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CTAG1AP78358 180 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CCL20P78556 96 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 DEFA6Q01524 100 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 CATR1Q13166 79 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 ELOBQ15370 118 aa1.09□□□□□ -2.23
PTPRC-208ENST00000427110 USF2Q15853 346 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms